Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 SSX2-201ENST00000336777 1410 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 SSX2B-203ENST00000612490 1410 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 OR10K1-201ENST00000289451 1073 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 RPL36AL-201ENST00000298289 746 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 ARL4A-202ENST00000396662 1296 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 CENPIP1-201ENST00000425713 902 ntBASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 AL596268.1-201ENST00000427910 1048 ntBASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 AC004987.1-201ENST00000428627 508 ntBASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 USP9YP16-201ENST00000430287 407 ntBASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 AC005534.2-201ENST00000431047 433 ntBASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 AL607028.1-201ENST00000433455 794 ntTSL 3 BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 USP9YP23-201ENST00000455085 407 ntBASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 VAMP2-203ENST00000481878 557 ntAPPRIS ALT1 TSL 2 BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 RN7SL617P-201ENST00000485298 308 ntBASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 AC008427.1-201ENST00000503102 655 ntBASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 GTF2F2P1-201ENST00000511083 675 ntBASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 RNU6-718P-201ENST00000516166 105 ntBASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 AC103769.1-201ENST00000518507 283 ntTSL 3 BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 LINC02359-201ENST00000545642 643 ntTSL 3 BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 AL355836.1-201ENST00000555951 870 ntBASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 AC009081.1-201ENST00000567862 565 ntTSL 4 BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 AC010980.1-201ENST00000587192 1142 ntBASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 AC010680.4-201ENST00000605334 543 ntBASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 AL353622.2-201ENST00000605846 425 ntBASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 BHLHE23-202ENST00000612929 1109 ntBASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 S100Z-203ENST00000613039 671 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 AC079248.2-201ENST00000623779 326 ntBASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 TPD52L3-201ENST00000314556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 SH3YL1-205ENST00000403712 1695 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP3-3Q9BYR6 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
KRTAP3-3Q9BYR6 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP3-3Q9BYR6 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC10.78□□□□□ -0.68
KRTAP3-3Q9BYR6 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP3-3Q9BYR6 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP3-3Q9BYR6 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP3-3Q9BYR6 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP3-3Q9BYR6 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP3-3Q9BYR6 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP3-3Q9BYR6 AC026356.2-201ENST00000614539 1796 ntBASIC10.78□□□□□ -0.68
KRTAP3-3Q9BYR6 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP3-3Q9BYR6 PWRN1-212ENST00000569908 1435 ntBASIC10.78□□□□□ -0.68
KRTAP3-3Q9BYR6 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC10.78□□□□□ -0.68
KRTAP3-3Q9BYR6 BTN3A2-202ENST00000377708 1634 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP3-3Q9BYR6 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP3-3Q9BYR6 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP3-3Q9BYR6 Y_RNA.144-201ENST00000363521 113 ntBASIC10.78□□□□□ -0.68
KRTAP3-3Q9BYR6 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC10.78□□□□□ -0.68
KRTAP3-3Q9BYR6 AL356653.1-201ENST00000402743 360 ntBASIC10.78□□□□□ -0.68
KRTAP3-3Q9BYR6 AL122008.2-201ENST00000412915 570 ntBASIC10.78□□□□□ -0.68
KRTAP3-3Q9BYR6 RPS27AP7-201ENST00000422792 455 ntBASIC10.78□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms