Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
VGLL1Q99990 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
VGLL1Q99990 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VGLL1Q99990 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VGLL1Q99990 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VGLL1Q99990 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VGLL1Q99990 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VGLL1Q99990 AC092850.2-201ENST00000623821 2697 ntBASIC13.04□□□□□ -0.32
VGLL1Q99990 AC078925.2-201ENST00000624013 1973 ntBASIC13.04□□□□□ -0.32
VGLL1Q99990 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
VGLL1Q99990 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
VGLL1Q99990 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC13.04□□□□□ -0.32
VGLL1Q99990 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC13.04□□□□□ -0.32
VGLL1Q99990 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VGLL1Q99990 TERF1P1-201ENST00000311003 1181 ntBASIC13.04□□□□□ -0.32
VGLL1Q99990 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC13.04□□□□□ -0.32
VGLL1Q99990 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VGLL1Q99990 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VGLL1Q99990 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
VGLL1Q99990 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VGLL1Q99990 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
VGLL1Q99990 AC113347.1-201ENST00000413321 391 ntBASIC13.04□□□□□ -0.32
VGLL1Q99990 AC007967.3-201ENST00000434308 558 ntBASIC13.04□□□□□ -0.32
VGLL1Q99990 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC13.04□□□□□ -0.32
VGLL1Q99990 AC112907.2-201ENST00000448639 330 ntBASIC13.04□□□□□ -0.32
VGLL1Q99990 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
VGLL1Q99990 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC13.04□□□□□ -0.32
VGLL1Q99990 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC13.04□□□□□ -0.32
VGLL1Q99990 AC019129.2-201ENST00000609837 1235 ntBASIC13.04□□□□□ -0.32
VGLL1Q99990 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC13.04□□□□□ -0.32
VGLL1Q99990 AC005363.2-201ENST00000618631 242 ntBASIC13.04□□□□□ -0.32
VGLL1Q99990 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VGLL1Q99990 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
VGLL1Q99990 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VGLL1Q99990 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VGLL1Q99990 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VGLL1Q99990 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
VGLL1Q99990 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
VGLL1Q99990 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.04□□□□□ -0.32
VGLL1Q99990 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
VGLL1Q99990 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VGLL1Q99990 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VGLL1Q99990 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC13.04□□□□□ -0.32
VGLL1Q99990 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
VGLL1Q99990 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VGLL1Q99990 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VGLL1Q99990 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.03□□□□□ -0.32
VGLL1Q99990 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
VGLL1Q99990 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC13.03□□□□□ -0.32
VGLL1Q99990 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VGLL1Q99990 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
VGLL1Q99990 DOC2GP-204ENST00000639052 2548 ntBASIC13.03□□□□□ -0.32
VGLL1Q99990 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VGLL1Q99990 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC13.03□□□□□ -0.32
VGLL1Q99990 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VGLL1Q99990 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC13.03□□□□□ -0.32
VGLL1Q99990 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VGLL1Q99990 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
VGLL1Q99990 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
VGLL1Q99990 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VGLL1Q99990 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC13.03□□□□□ -0.32
VGLL1Q99990 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
VGLL1Q99990 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VGLL1Q99990 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC13.03□□□□□ -0.32
VGLL1Q99990 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC13.03□□□□□ -0.32
VGLL1Q99990 AC133561.5-201ENST00000635547 218 ntBASIC13.03□□□□□ -0.32
VGLL1Q99990 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.03□□□□□ -0.32
VGLL1Q99990 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
VGLL1Q99990 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VGLL1Q99990 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VGLL1Q99990 UBC-206ENST00000538617 1303 ntTSL 5 BASIC13.03□□□□□ -0.32
VGLL1Q99990 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VGLL1Q99990 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VGLL1Q99990 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
VGLL1Q99990 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
VGLL1Q99990 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VGLL1Q99990 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VGLL1Q99990 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VGLL1Q99990 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
VGLL1Q99990 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VGLL1Q99990 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VGLL1Q99990 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VGLL1Q99990 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VGLL1Q99990 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VGLL1Q99990 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VGLL1Q99990 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VGLL1Q99990 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VGLL1Q99990 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
VGLL1Q99990 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VGLL1Q99990 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
VGLL1Q99990 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC13.03□□□□□ -0.32
VGLL1Q99990 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
VGLL1Q99990 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
VGLL1Q99990 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
VGLL1Q99990 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
VGLL1Q99990 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
VGLL1Q99990 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VGLL1Q99990 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VGLL1Q99990 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
VGLL1Q99990 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.02□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms