Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC092865.5-201ENST00000545435 363 ntBASIC17.9■□□□□ 0.46
SMOQ99835 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.9■□□□□ 0.46
SMOQ99835 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SMOQ99835 AC023141.13-201ENST00000604991 943 ntBASIC17.9■□□□□ 0.46
SMOQ99835 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMOQ99835 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMOQ99835 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SMOQ99835 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SMOQ99835 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMOQ99835 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
SMOQ99835 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SMOQ99835 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SMOQ99835 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.9■□□□□ 0.46
SMOQ99835 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMOQ99835 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
SMOQ99835 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMOQ99835 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMOQ99835 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMOQ99835 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.89■□□□□ 0.45
SMOQ99835 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMOQ99835 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMOQ99835 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMOQ99835 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMOQ99835 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMOQ99835 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.89■□□□□ 0.45
SMOQ99835 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMOQ99835 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMOQ99835 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMOQ99835 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMOQ99835 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.89■□□□□ 0.45
SMOQ99835 AL513480.1-201ENST00000451731 511 ntBASIC17.89■□□□□ 0.45
SMOQ99835 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SMOQ99835 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.89■□□□□ 0.45
SMOQ99835 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMOQ99835 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMOQ99835 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.89■□□□□ 0.45
SMOQ99835 AC007064.4-201ENST00000637740 555 ntBASIC17.89■□□□□ 0.45
SMOQ99835 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
SMOQ99835 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMOQ99835 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.89■□□□□ 0.45
SMOQ99835 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
SMOQ99835 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMOQ99835 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.89■□□□□ 0.45
SMOQ99835 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMOQ99835 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.89■□□□□ 0.45
SMOQ99835 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMOQ99835 TOP3BP1-201ENST00000420768 1380 ntBASIC17.89■□□□□ 0.45
SMOQ99835 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMOQ99835 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMOQ99835 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
SMOQ99835 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.89■□□□□ 0.45
SMOQ99835 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMOQ99835 AP001094.4-201ENST00000579008 2176 ntBASIC17.89■□□□□ 0.45
SMOQ99835 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SMOQ99835 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
SMOQ99835 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMOQ99835 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.88■□□□□ 0.45
SMOQ99835 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.88■□□□□ 0.45
SMOQ99835 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMOQ99835 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SMOQ99835 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SMOQ99835 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.88■□□□□ 0.45
SMOQ99835 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMOQ99835 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMOQ99835 AC060834.1-201ENST00000443027 2032 ntBASIC17.88■□□□□ 0.45
SMOQ99835 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMOQ99835 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMOQ99835 MCCD1P2-201ENST00000423228 335 ntBASIC17.88■□□□□ 0.45
SMOQ99835 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.88■□□□□ 0.45
SMOQ99835 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.88■□□□□ 0.45
SMOQ99835 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.88■□□□□ 0.45
SMOQ99835 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.88■□□□□ 0.45
SMOQ99835 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.88■□□□□ 0.45
SMOQ99835 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.88■□□□□ 0.45
SMOQ99835 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.88■□□□□ 0.45
SMOQ99835 PDPK2P-202ENST00000562415 1191 ntBASIC17.88■□□□□ 0.45
SMOQ99835 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.88■□□□□ 0.45
SMOQ99835 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SMOQ99835 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SMOQ99835 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMOQ99835 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SMOQ99835 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SMOQ99835 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMOQ99835 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SMOQ99835 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.88■□□□□ 0.45
SMOQ99835 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SMOQ99835 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMOQ99835 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SMOQ99835 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMOQ99835 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.87■□□□□ 0.45
SMOQ99835 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.87■□□□□ 0.45
SMOQ99835 KRT18P13-201ENST00000400056 1290 ntBASIC17.87■□□□□ 0.45
SMOQ99835 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SMOQ99835 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.87■□□□□ 0.45
SMOQ99835 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.87■□□□□ 0.45
SMOQ99835 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.87■□□□□ 0.45
SMOQ99835 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMOQ99835 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.87■□□□□ 0.45
SMOQ99835 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.87■□□□□ 0.45
SMOQ99835 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms