Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
CDCA3Q99618 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
CDCA3Q99618 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDCA3Q99618 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDCA3Q99618 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDCA3Q99618 HLA-H-201ENST00000383620 1096 ntBASIC17.64■□□□□ 0.41
CDCA3Q99618 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.64■□□□□ 0.41
CDCA3Q99618 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.64■□□□□ 0.41
CDCA3Q99618 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.64■□□□□ 0.41
CDCA3Q99618 AC009477.1-201ENST00000452936 217 ntBASIC17.64■□□□□ 0.41
CDCA3Q99618 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.64■□□□□ 0.41
CDCA3Q99618 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.64■□□□□ 0.41
CDCA3Q99618 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.64■□□□□ 0.41
CDCA3Q99618 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDCA3Q99618 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.64■□□□□ 0.41
CDCA3Q99618 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDCA3Q99618 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.64■□□□□ 0.41
CDCA3Q99618 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.64■□□□□ 0.41
CDCA3Q99618 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.64■□□□□ 0.41
CDCA3Q99618 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.64■□□□□ 0.41
CDCA3Q99618 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDCA3Q99618 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.64■□□□□ 0.41
CDCA3Q99618 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDCA3Q99618 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.64■□□□□ 0.41
CDCA3Q99618 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CDCA3Q99618 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.64■□□□□ 0.41
CDCA3Q99618 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDCA3Q99618 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CDCA3Q99618 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDCA3Q99618 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDCA3Q99618 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDCA3Q99618 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDCA3Q99618 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.63■□□□□ 0.41
CDCA3Q99618 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDCA3Q99618 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDCA3Q99618 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDCA3Q99618 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CDCA3Q99618 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDCA3Q99618 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CDCA3Q99618 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.63■□□□□ 0.41
CDCA3Q99618 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CDCA3Q99618 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDCA3Q99618 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDCA3Q99618 AC098614.1-201ENST00000368528 745 ntBASIC17.63■□□□□ 0.41
CDCA3Q99618 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDCA3Q99618 AL353705.2-201ENST00000428243 662 ntBASIC17.63■□□□□ 0.41
CDCA3Q99618 ATP5G2P4-201ENST00000442175 420 ntBASIC17.63■□□□□ 0.41
CDCA3Q99618 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDCA3Q99618 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.63■□□□□ 0.41
CDCA3Q99618 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.63■□□□□ 0.41
CDCA3Q99618 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.63■□□□□ 0.41
CDCA3Q99618 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.63■□□□□ 0.41
CDCA3Q99618 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.63■□□□□ 0.41
CDCA3Q99618 AP000974.1-201ENST00000623909 2387 ntBASIC17.63■□□□□ 0.41
CDCA3Q99618 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CDCA3Q99618 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDCA3Q99618 AC087499.5-201ENST00000452760 1342 ntBASIC17.63■□□□□ 0.41
CDCA3Q99618 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CDCA3Q99618 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
CDCA3Q99618 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
CDCA3Q99618 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDCA3Q99618 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDCA3Q99618 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDCA3Q99618 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDCA3Q99618 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDCA3Q99618 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDCA3Q99618 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.63■□□□□ 0.41
CDCA3Q99618 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA3Q99618 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.62■□□□□ 0.41
CDCA3Q99618 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.62■□□□□ 0.41
CDCA3Q99618 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA3Q99618 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.62■□□□□ 0.41
CDCA3Q99618 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA3Q99618 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA3Q99618 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.62■□□□□ 0.41
CDCA3Q99618 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA3Q99618 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CDCA3Q99618 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA3Q99618 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA3Q99618 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CDCA3Q99618 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA3Q99618 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA3Q99618 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.62■□□□□ 0.41
CDCA3Q99618 AL353779.1-201ENST00000434793 351 ntBASIC17.62■□□□□ 0.41
CDCA3Q99618 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA3Q99618 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.62■□□□□ 0.41
CDCA3Q99618 GPR53P-205ENST00000457298 1084 ntBASIC17.62■□□□□ 0.41
CDCA3Q99618 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA3Q99618 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA3Q99618 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.62■□□□□ 0.41
CDCA3Q99618 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.62■□□□□ 0.41
CDCA3Q99618 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.62■□□□□ 0.41
CDCA3Q99618 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.62■□□□□ 0.41
CDCA3Q99618 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA3Q99618 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA3Q99618 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA3Q99618 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA3Q99618 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA3Q99618 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.62■□□□□ 0.41
CDCA3Q99618 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms