Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NECTIN4Q96NY8 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NECTIN4Q96NY8 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NECTIN4Q96NY8 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NECTIN4Q96NY8 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.63■□□□□ 0.41
NECTIN4Q96NY8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NECTIN4Q96NY8 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NECTIN4Q96NY8 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.63■□□□□ 0.41
NECTIN4Q96NY8 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
NECTIN4Q96NY8 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NECTIN4Q96NY8 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
NECTIN4Q96NY8 GNAS-203ENST00000306120 1878 ntBASIC17.63■□□□□ 0.41
NECTIN4Q96NY8 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 REXO1L11P-201ENST00000620964 1927 ntBASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 MEIS3P1-201ENST00000495167 958 ntBASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 AC027369.6-201ENST00000525520 931 ntBASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 MIR4453-201ENST00000584019 89 ntBASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 AC004233.3-201ENST00000607794 1269 ntBASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
NECTIN4Q96NY8 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NECTIN4Q96NY8 HCG11-201ENST00000411553 5696 ntBASIC17.61■□□□□ 0.41
NECTIN4Q96NY8 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
NECTIN4Q96NY8 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NECTIN4Q96NY8 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NECTIN4Q96NY8 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NECTIN4Q96NY8 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.61■□□□□ 0.41
NECTIN4Q96NY8 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.61■□□□□ 0.41
NECTIN4Q96NY8 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NECTIN4Q96NY8 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NECTIN4Q96NY8 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
NECTIN4Q96NY8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
NECTIN4Q96NY8 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NECTIN4Q96NY8 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NECTIN4Q96NY8 COX5BP8-201ENST00000416911 349 ntBASIC17.61■□□□□ 0.41
NECTIN4Q96NY8 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.61■□□□□ 0.41
NECTIN4Q96NY8 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
NECTIN4Q96NY8 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.61■□□□□ 0.41
NECTIN4Q96NY8 AL031055.1-201ENST00000606362 631 ntBASIC17.61■□□□□ 0.41
NECTIN4Q96NY8 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
NECTIN4Q96NY8 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NECTIN4Q96NY8 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NECTIN4Q96NY8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.61■□□□□ 0.41
NECTIN4Q96NY8 AC100757.3-201ENST00000622361 1406 ntBASIC17.61■□□□□ 0.41
NECTIN4Q96NY8 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NECTIN4Q96NY8 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NECTIN4Q96NY8 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.61■□□□□ 0.41
NECTIN4Q96NY8 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
NECTIN4Q96NY8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.61■□□□□ 0.41
NECTIN4Q96NY8 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.61■□□□□ 0.41
NECTIN4Q96NY8 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NECTIN4Q96NY8 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms