Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SUSD3Q96L08 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SUSD3Q96L08 AL021920.2-201ENST00000624828 1351 ntBASIC18.04■□□□□ 0.48
SUSD3Q96L08 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SUSD3Q96L08 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SUSD3Q96L08 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SUSD3Q96L08 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SUSD3Q96L08 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SUSD3Q96L08 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.03■□□□□ 0.48
SUSD3Q96L08 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SUSD3Q96L08 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SUSD3Q96L08 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SUSD3Q96L08 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SUSD3Q96L08 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SUSD3Q96L08 AL671277.1-201ENST00000429656 993 ntBASIC18.03■□□□□ 0.48
SUSD3Q96L08 FAM86C2P-203ENST00000528684 1004 ntBASIC18.03■□□□□ 0.48
SUSD3Q96L08 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.03■□□□□ 0.48
SUSD3Q96L08 AC124947.2-201ENST00000547118 1133 ntBASIC18.03■□□□□ 0.48
SUSD3Q96L08 MPDU1-223ENST00000582151 728 ntBASIC18.03■□□□□ 0.48
SUSD3Q96L08 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.03■□□□□ 0.48
SUSD3Q96L08 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SUSD3Q96L08 AL009183.1-201ENST00000603760 355 ntBASIC18.03■□□□□ 0.48
SUSD3Q96L08 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SUSD3Q96L08 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SUSD3Q96L08 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.03■□□□□ 0.48
SUSD3Q96L08 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SUSD3Q96L08 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SUSD3Q96L08 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SUSD3Q96L08 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SUSD3Q96L08 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SUSD3Q96L08 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SUSD3Q96L08 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SUSD3Q96L08 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.03■□□□□ 0.48
SUSD3Q96L08 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.02■□□□□ 0.48
SUSD3Q96L08 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SUSD3Q96L08 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.02■□□□□ 0.48
SUSD3Q96L08 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SUSD3Q96L08 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.02■□□□□ 0.48
SUSD3Q96L08 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SUSD3Q96L08 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SUSD3Q96L08 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.02■□□□□ 0.48
SUSD3Q96L08 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SUSD3Q96L08 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SUSD3Q96L08 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.02■□□□□ 0.48
SUSD3Q96L08 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.02■□□□□ 0.48
SUSD3Q96L08 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.02■□□□□ 0.48
SUSD3Q96L08 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.02■□□□□ 0.48
SUSD3Q96L08 AC109635.5-201ENST00000533593 962 ntBASIC18.02■□□□□ 0.48
SUSD3Q96L08 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.02■□□□□ 0.48
SUSD3Q96L08 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.02■□□□□ 0.48
SUSD3Q96L08 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
SUSD3Q96L08 AC087641.1-201ENST00000557561 1021 ntBASIC18.02■□□□□ 0.48
SUSD3Q96L08 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.02■□□□□ 0.48
SUSD3Q96L08 AC026120.1-201ENST00000611536 926 ntBASIC18.02■□□□□ 0.48
SUSD3Q96L08 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.02■□□□□ 0.48
SUSD3Q96L08 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SUSD3Q96L08 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.02■□□□□ 0.48
SUSD3Q96L08 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
SUSD3Q96L08 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SUSD3Q96L08 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SUSD3Q96L08 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.02■□□□□ 0.47
SUSD3Q96L08 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SUSD3Q96L08 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
SUSD3Q96L08 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.02■□□□□ 0.47
SUSD3Q96L08 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
SUSD3Q96L08 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
SUSD3Q96L08 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
SUSD3Q96L08 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SUSD3Q96L08 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SUSD3Q96L08 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
SUSD3Q96L08 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SUSD3Q96L08 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SUSD3Q96L08 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SUSD3Q96L08 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SUSD3Q96L08 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.01■□□□□ 0.47
SUSD3Q96L08 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SUSD3Q96L08 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SUSD3Q96L08 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.01■□□□□ 0.47
SUSD3Q96L08 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SUSD3Q96L08 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.01■□□□□ 0.47
SUSD3Q96L08 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.01■□□□□ 0.47
SUSD3Q96L08 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.01■□□□□ 0.47
SUSD3Q96L08 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.01■□□□□ 0.47
SUSD3Q96L08 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
SUSD3Q96L08 AC027796.2-201ENST00000575326 344 ntBASIC18.01■□□□□ 0.47
SUSD3Q96L08 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.01■□□□□ 0.47
SUSD3Q96L08 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.01■□□□□ 0.47
SUSD3Q96L08 AL161645.1-201ENST00000622716 1255 ntBASIC18.01■□□□□ 0.47
SUSD3Q96L08 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SUSD3Q96L08 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SUSD3Q96L08 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
SUSD3Q96L08 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
SUSD3Q96L08 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SUSD3Q96L08 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.01■□□□□ 0.47
SUSD3Q96L08 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SUSD3Q96L08 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SUSD3Q96L08 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.01■□□□□ 0.47
SUSD3Q96L08 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.01■□□□□ 0.47
SUSD3Q96L08 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.01■□□□□ 0.47
SUSD3Q96L08 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms