Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VPS33AQ96AX1 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS33AQ96AX1 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.51■□□□□ 0.23
VPS33AQ96AX1 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.51■□□□□ 0.23
VPS33AQ96AX1 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
VPS33AQ96AX1 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
VPS33AQ96AX1 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.51■□□□□ 0.23
VPS33AQ96AX1 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS33AQ96AX1 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
VPS33AQ96AX1 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
VPS33AQ96AX1 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VPS33AQ96AX1 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
VPS33AQ96AX1 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS33AQ96AX1 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS33AQ96AX1 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
VPS33AQ96AX1 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS33AQ96AX1 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.51■□□□□ 0.23
VPS33AQ96AX1 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS33AQ96AX1 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS33AQ96AX1 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
VPS33AQ96AX1 AC006449.5-201ENST00000610658 2098 ntBASIC16.51■□□□□ 0.23
VPS33AQ96AX1 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.51■□□□□ 0.23
VPS33AQ96AX1 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS33AQ96AX1 TSPY5P-201ENST00000426936 936 ntBASIC16.51■□□□□ 0.23
VPS33AQ96AX1 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS33AQ96AX1 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.51■□□□□ 0.23
VPS33AQ96AX1 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
VPS33AQ96AX1 AC124947.2-201ENST00000547118 1133 ntBASIC16.51■□□□□ 0.23
VPS33AQ96AX1 AC005363.2-201ENST00000618631 242 ntBASIC16.51■□□□□ 0.23
VPS33AQ96AX1 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS33AQ96AX1 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.51■□□□□ 0.23
VPS33AQ96AX1 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.51■□□□□ 0.23
VPS33AQ96AX1 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS33AQ96AX1 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VPS33AQ96AX1 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS33AQ96AX1 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VPS33AQ96AX1 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS33AQ96AX1 AL049757.1-201ENST00000616842 1596 ntBASIC16.51■□□□□ 0.23
VPS33AQ96AX1 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS33AQ96AX1 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
VPS33AQ96AX1 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 AC097493.4-201ENST00000641197 219 ntBASIC16.5■□□□□ 0.23
VPS33AQ96AX1 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 PKD1P5-201ENST00000532415 10291 ntBASIC16.5■□□□□ 0.23
VPS33AQ96AX1 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 EGFEM1P-202ENST00000431685 1563 ntBASIC16.5■□□□□ 0.23
VPS33AQ96AX1 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS33AQ96AX1 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.49■□□□□ 0.23
VPS33AQ96AX1 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS33AQ96AX1 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS33AQ96AX1 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.49■□□□□ 0.23
VPS33AQ96AX1 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
VPS33AQ96AX1 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS33AQ96AX1 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VPS33AQ96AX1 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS33AQ96AX1 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS33AQ96AX1 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
VPS33AQ96AX1 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
VPS33AQ96AX1 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VPS33AQ96AX1 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS33AQ96AX1 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS33AQ96AX1 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS33AQ96AX1 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS33AQ96AX1 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS33AQ96AX1 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS33AQ96AX1 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms