Protein–RNA interactions for Protein: Q96AE4

FUBP1, Far upstream element-binding protein 1, humanhuman

Known RBP Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP1Q96AE4 KRT18P3-201ENST00000451602 1288 ntBASIC17.13■□□□□ 0.33
FUBP1Q96AE4 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
FUBP1Q96AE4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.13■□□□□ 0.33
FUBP1Q96AE4 IGHV3-65-201ENST00000523210 341 ntBASIC17.13■□□□□ 0.33
FUBP1Q96AE4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.13■□□□□ 0.33
FUBP1Q96AE4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.13■□□□□ 0.33
FUBP1Q96AE4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FUBP1Q96AE4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
FUBP1Q96AE4 AC008667.4-201ENST00000607370 168 ntBASIC17.13■□□□□ 0.33
FUBP1Q96AE4 AL805961.1-202ENST00000641562 540 ntBASIC17.13■□□□□ 0.33
FUBP1Q96AE4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FUBP1Q96AE4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.13■□□□□ 0.33
FUBP1Q96AE4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
FUBP1Q96AE4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
FUBP1Q96AE4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FUBP1Q96AE4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FUBP1Q96AE4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
FUBP1Q96AE4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.13■□□□□ 0.33
FUBP1Q96AE4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 AC108073.2-201ENST00000464002 357 ntBASIC17.12■□□□□ 0.33
FUBP1Q96AE4 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.12■□□□□ 0.33
FUBP1Q96AE4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
FUBP1Q96AE4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
FUBP1Q96AE4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FUBP1Q96AE4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FUBP1Q96AE4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FUBP1Q96AE4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
FUBP1Q96AE4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FUBP1Q96AE4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.11■□□□□ 0.33
FUBP1Q96AE4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.11■□□□□ 0.33
FUBP1Q96AE4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FUBP1Q96AE4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FUBP1Q96AE4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FUBP1Q96AE4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FUBP1Q96AE4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
FUBP1Q96AE4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.11■□□□□ 0.33
FUBP1Q96AE4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.11■□□□□ 0.33
FUBP1Q96AE4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
FUBP1Q96AE4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.11■□□□□ 0.33
FUBP1Q96AE4 OR7E47P-204ENST00000575924 449 ntBASIC17.11■□□□□ 0.33
FUBP1Q96AE4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.11■□□□□ 0.33
FUBP1Q96AE4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FUBP1Q96AE4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
FUBP1Q96AE4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FUBP1Q96AE4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FUBP1Q96AE4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FUBP1Q96AE4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FUBP1Q96AE4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.11■□□□□ 0.33
FUBP1Q96AE4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
FUBP1Q96AE4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FUBP1Q96AE4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
FUBP1Q96AE4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FUBP1Q96AE4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.11■□□□□ 0.33
FUBP1Q96AE4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FUBP1Q96AE4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FUBP1Q96AE4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
FUBP1Q96AE4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FUBP1Q96AE4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.1■□□□□ 0.33
FUBP1Q96AE4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FUBP1Q96AE4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
FUBP1Q96AE4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FUBP1Q96AE4 AC060834.1-201ENST00000443027 2032 ntBASIC17.1■□□□□ 0.33
FUBP1Q96AE4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms