Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 AC004817.3-201ENST00000602957 2129 ntBASIC15.82■□□□□ 0.12
CNOT9Q92600 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT9Q92600 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT9Q92600 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
CNOT9Q92600 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT9Q92600 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT9Q92600 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT9Q92600 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT9Q92600 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.82■□□□□ 0.12
CNOT9Q92600 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.82■□□□□ 0.12
CNOT9Q92600 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.82■□□□□ 0.12
CNOT9Q92600 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.82■□□□□ 0.12
CNOT9Q92600 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.82■□□□□ 0.12
CNOT9Q92600 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.82■□□□□ 0.12
CNOT9Q92600 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT9Q92600 AC073592.4-201ENST00000623827 446 ntBASIC15.82■□□□□ 0.12
CNOT9Q92600 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT9Q92600 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CNOT9Q92600 SIGLEC16-201ENST00000599858 1437 ntBASIC15.82■□□□□ 0.12
CNOT9Q92600 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT9Q92600 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CNOT9Q92600 OR6D1P-203ENST00000641209 4860 ntBASIC15.82■□□□□ 0.12
CNOT9Q92600 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT9Q92600 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT9Q92600 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.82■□□□□ 0.12
CNOT9Q92600 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT9Q92600 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT9Q92600 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CNOT9Q92600 AC105020.1-201ENST00000435356 2205 ntBASIC15.82■□□□□ 0.12
CNOT9Q92600 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT9Q92600 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNOT9Q92600 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT9Q92600 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT9Q92600 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CNOT9Q92600 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT9Q92600 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT9Q92600 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
CNOT9Q92600 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT9Q92600 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT9Q92600 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT9Q92600 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT9Q92600 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.81■□□□□ 0.12
CNOT9Q92600 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT9Q92600 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT9Q92600 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT9Q92600 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT9Q92600 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.81■□□□□ 0.12
CNOT9Q92600 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.81■□□□□ 0.12
CNOT9Q92600 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.81■□□□□ 0.12
CNOT9Q92600 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT9Q92600 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT9Q92600 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.81■□□□□ 0.12
CNOT9Q92600 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.81■□□□□ 0.12
CNOT9Q92600 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.81■□□□□ 0.12
CNOT9Q92600 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT9Q92600 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT9Q92600 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT9Q92600 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.81■□□□□ 0.12
CNOT9Q92600 AC097637.2-201ENST00000624096 1997 ntBASIC15.81■□□□□ 0.12
CNOT9Q92600 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.81■□□□□ 0.12
CNOT9Q92600 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.81■□□□□ 0.12
CNOT9Q92600 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT9Q92600 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT9Q92600 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNOT9Q92600 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CNOT9Q92600 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CNOT9Q92600 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.8■□□□□ 0.12
CNOT9Q92600 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT9Q92600 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT9Q92600 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CNOT9Q92600 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.8■□□□□ 0.12
CNOT9Q92600 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.8■□□□□ 0.12
CNOT9Q92600 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT9Q92600 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CNOT9Q92600 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.8■□□□□ 0.12
CNOT9Q92600 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT9Q92600 GPR89P-201ENST00000407924 1495 ntBASIC15.8■□□□□ 0.12
CNOT9Q92600 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.8■□□□□ 0.12
CNOT9Q92600 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT9Q92600 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CNOT9Q92600 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CNOT9Q92600 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT9Q92600 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CNOT9Q92600 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.8■□□□□ 0.12
CNOT9Q92600 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CNOT9Q92600 AC124947.2-201ENST00000547118 1133 ntBASIC15.8■□□□□ 0.12
CNOT9Q92600 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
CNOT9Q92600 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT9Q92600 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.8■□□□□ 0.12
CNOT9Q92600 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.8■□□□□ 0.12
CNOT9Q92600 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT9Q92600 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.8■□□□□ 0.12
CNOT9Q92600 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.8■□□□□ 0.12
CNOT9Q92600 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT9Q92600 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CNOT9Q92600 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT9Q92600 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.8■□□□□ 0.12
CNOT9Q92600 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT9Q92600 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNOT9Q92600 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms