Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
AP3S1Q92572 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3S1Q92572 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP3S1Q92572 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3S1Q92572 PPP1R14BP3-201ENST00000509033 445 ntBASIC15.15■□□□□ 0.02
AP3S1Q92572 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.15■□□□□ 0.02
AP3S1Q92572 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC15.15■□□□□ 0.02
AP3S1Q92572 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3S1Q92572 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.15■□□□□ 0.02
AP3S1Q92572 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3S1Q92572 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3S1Q92572 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3S1Q92572 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3S1Q92572 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.15■□□□□ 0.02
AP3S1Q92572 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.15■□□□□ 0.02
AP3S1Q92572 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3S1Q92572 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3S1Q92572 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.15■□□□□ 0.02
AP3S1Q92572 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.15■□□□□ 0.02
AP3S1Q92572 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
AP3S1Q92572 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.15■□□□□ 0.02
AP3S1Q92572 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3S1Q92572 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3S1Q92572 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3S1Q92572 AC126177.1-201ENST00000547829 2218 ntBASIC15.15■□□□□ 0.02
AP3S1Q92572 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP3S1Q92572 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S1Q92572 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
AP3S1Q92572 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S1Q92572 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
AP3S1Q92572 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
AP3S1Q92572 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S1Q92572 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S1Q92572 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
AP3S1Q92572 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
AP3S1Q92572 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
AP3S1Q92572 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S1Q92572 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S1Q92572 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
AP3S1Q92572 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S1Q92572 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
AP3S1Q92572 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.14■□□□□ 0.01
AP3S1Q92572 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S1Q92572 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S1Q92572 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S1Q92572 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.14■□□□□ 0.01
AP3S1Q92572 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S1Q92572 ISG20-202ENST00000379224 540 ntTSL 3 BASIC15.14■□□□□ 0.01
AP3S1Q92572 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
AP3S1Q92572 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC15.14■□□□□ 0.01
AP3S1Q92572 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.14■□□□□ 0.01
AP3S1Q92572 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC15.14■□□□□ 0.01
AP3S1Q92572 AF186192.3-201ENST00000583427 947 ntBASIC15.14■□□□□ 0.01
AP3S1Q92572 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
AP3S1Q92572 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
AP3S1Q92572 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
AP3S1Q92572 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
AP3S1Q92572 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S1Q92572 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S1Q92572 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S1Q92572 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
AP3S1Q92572 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
AP3S1Q92572 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.14■□□□□ 0.01
AP3S1Q92572 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S1Q92572 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S1Q92572 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S1Q92572 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
AP3S1Q92572 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S1Q92572 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S1Q92572 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S1Q92572 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S1Q92572 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S1Q92572 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.14■□□□□ 0.01
AP3S1Q92572 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
AP3S1Q92572 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S1Q92572 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.14■□□□□ 0.01
AP3S1Q92572 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S1Q92572 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S1Q92572 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
AP3S1Q92572 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S1Q92572 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S1Q92572 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S1Q92572 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S1Q92572 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
AP3S1Q92572 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S1Q92572 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
AP3S1Q92572 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S1Q92572 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S1Q92572 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S1Q92572 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S1Q92572 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S1Q92572 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S1Q92572 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S1Q92572 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.13■□□□□ 0.01
AP3S1Q92572 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.13■□□□□ 0.01
AP3S1Q92572 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S1Q92572 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
AP3S1Q92572 AC026366.1-201ENST00000488803 879 ntBASIC15.13■□□□□ 0.01
AP3S1Q92572 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.13■□□□□ 0.01
AP3S1Q92572 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms