Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC148Q8NFR7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC148Q8NFR7 AP002414.1-201ENST00000391405 1147 ntBASIC19.74■□□□□ 0.75
CCDC148Q8NFR7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC148Q8NFR7 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC148Q8NFR7 AC012640.2-201ENST00000561606 901 ntBASIC19.74■□□□□ 0.75
CCDC148Q8NFR7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC148Q8NFR7 AL356488.2-201ENST00000602755 427 ntBASIC19.74■□□□□ 0.75
CCDC148Q8NFR7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC148Q8NFR7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC148Q8NFR7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC148Q8NFR7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC148Q8NFR7 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC148Q8NFR7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC148Q8NFR7 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC148Q8NFR7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC148Q8NFR7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
CCDC148Q8NFR7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC148Q8NFR7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CCDC148Q8NFR7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC148Q8NFR7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC148Q8NFR7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC148Q8NFR7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
CCDC148Q8NFR7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC148Q8NFR7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC148Q8NFR7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC148Q8NFR7 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC148Q8NFR7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC148Q8NFR7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC148Q8NFR7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC148Q8NFR7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
CCDC148Q8NFR7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC148Q8NFR7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC148Q8NFR7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC148Q8NFR7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC148Q8NFR7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC148Q8NFR7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CCDC148Q8NFR7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC148Q8NFR7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC148Q8NFR7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC148Q8NFR7 RNA5SP419-201ENST00000515908 135 ntBASIC19.73■□□□□ 0.75
CCDC148Q8NFR7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC148Q8NFR7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC148Q8NFR7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC148Q8NFR7 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC148Q8NFR7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC148Q8NFR7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC148Q8NFR7 AP001094.4-201ENST00000579008 2176 ntBASIC19.73■□□□□ 0.75
CCDC148Q8NFR7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC148Q8NFR7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC148Q8NFR7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC148Q8NFR7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC148Q8NFR7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CCDC148Q8NFR7 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC148Q8NFR7 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CCDC148Q8NFR7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC148Q8NFR7 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC148Q8NFR7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC148Q8NFR7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC148Q8NFR7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC148Q8NFR7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC148Q8NFR7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC148Q8NFR7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC148Q8NFR7 PTCHD3P3-201ENST00000403073 906 ntBASIC19.72■□□□□ 0.75
CCDC148Q8NFR7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC148Q8NFR7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC148Q8NFR7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC148Q8NFR7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC148Q8NFR7 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC148Q8NFR7 RPS15P9-201ENST00000494093 319 ntBASIC19.72■□□□□ 0.75
CCDC148Q8NFR7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC148Q8NFR7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC148Q8NFR7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC148Q8NFR7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC148Q8NFR7 AL049840.3-201ENST00000602669 611 ntBASIC19.72■□□□□ 0.75
CCDC148Q8NFR7 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC148Q8NFR7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC148Q8NFR7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC148Q8NFR7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC148Q8NFR7 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC148Q8NFR7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC148Q8NFR7 AP002414.3-201ENST00000589352 1468 ntBASIC19.72■□□□□ 0.75
CCDC148Q8NFR7 HLA-A-201ENST00000376802 1334 ntBASIC19.72■□□□□ 0.75
CCDC148Q8NFR7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CCDC148Q8NFR7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC148Q8NFR7 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC148Q8NFR7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC148Q8NFR7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC148Q8NFR7 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 AC243591.1-201ENST00000452967 1364 ntBASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms