Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 AL135999.2-201ENST00000622438 1686 ntBASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 AC018529.1-201ENST00000613063 361 ntBASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CCDC168Q8NDH2 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
CCDC168Q8NDH2 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CCDC168Q8NDH2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
CCDC168Q8NDH2 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC168Q8NDH2 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC168Q8NDH2 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.19□□□□□ -0.14
CCDC168Q8NDH2 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CCDC168Q8NDH2 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.19□□□□□ -0.14
CCDC168Q8NDH2 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC168Q8NDH2 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CCDC168Q8NDH2 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.19□□□□□ -0.14
CCDC168Q8NDH2 TMEM261P1-201ENST00000604899 340 ntBASIC14.19□□□□□ -0.14
CCDC168Q8NDH2 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.19□□□□□ -0.14
CCDC168Q8NDH2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC168Q8NDH2 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC168Q8NDH2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC168Q8NDH2 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC168Q8NDH2 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC168Q8NDH2 AC005332.7-201ENST00000614046 2005 ntBASIC14.19□□□□□ -0.14
CCDC168Q8NDH2 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC168Q8NDH2 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC168Q8NDH2 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CCDC168Q8NDH2 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC168Q8NDH2 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC168Q8NDH2 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC168Q8NDH2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC168Q8NDH2 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC168Q8NDH2 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC168Q8NDH2 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC168Q8NDH2 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.19□□□□□ -0.14
CCDC168Q8NDH2 RN7SL190P-201ENST00000582519 257 ntBASIC14.19□□□□□ -0.14
CCDC168Q8NDH2 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC168Q8NDH2 AC133552.6-201ENST00000613406 534 ntBASIC14.19□□□□□ -0.14
CCDC168Q8NDH2 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC168Q8NDH2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC168Q8NDH2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 CLDN5-201ENST00000403084 2357 ntBASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 AC046185.3-201ENST00000623228 1824 ntBASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 AC016027.1-202ENST00000607927 1699 ntBASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 AC087499.6-201ENST00000411576 835 ntBASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 BNIP3P42-201ENST00000454982 569 ntBASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms