Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCML4Q8N228 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCML4Q8N228 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SCML4Q8N228 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SCML4Q8N228 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.73■□□□□ 0.43
SCML4Q8N228 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SCML4Q8N228 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.73■□□□□ 0.43
SCML4Q8N228 AL121761.2-201ENST00000598007 1648 ntBASIC17.73■□□□□ 0.43
SCML4Q8N228 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SCML4Q8N228 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.73■□□□□ 0.43
SCML4Q8N228 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCML4Q8N228 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.73■□□□□ 0.43
SCML4Q8N228 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCML4Q8N228 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCML4Q8N228 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SCML4Q8N228 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.73■□□□□ 0.43
SCML4Q8N228 AP002490.2-201ENST00000524791 560 ntBASIC17.73■□□□□ 0.43
SCML4Q8N228 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
SCML4Q8N228 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SCML4Q8N228 MIR4515-201ENST00000584082 81 ntBASIC17.73■□□□□ 0.43
SCML4Q8N228 AC023141.13-201ENST00000604991 943 ntBASIC17.73■□□□□ 0.43
SCML4Q8N228 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCML4Q8N228 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCML4Q8N228 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCML4Q8N228 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCML4Q8N228 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
SCML4Q8N228 LINC00895-201ENST00000629028 1637 ntBASIC17.72■□□□□ 0.43
SCML4Q8N228 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCML4Q8N228 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SCML4Q8N228 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
SCML4Q8N228 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCML4Q8N228 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
SCML4Q8N228 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SCML4Q8N228 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
SCML4Q8N228 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCML4Q8N228 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
SCML4Q8N228 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCML4Q8N228 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCML4Q8N228 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCML4Q8N228 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.72■□□□□ 0.43
SCML4Q8N228 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCML4Q8N228 AC004832.2-201ENST00000426397 482 ntBASIC17.72■□□□□ 0.43
SCML4Q8N228 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.72■□□□□ 0.43
SCML4Q8N228 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.72■□□□□ 0.43
SCML4Q8N228 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SCML4Q8N228 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.72■□□□□ 0.43
SCML4Q8N228 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SCML4Q8N228 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.72■□□□□ 0.43
SCML4Q8N228 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.72■□□□□ 0.43
SCML4Q8N228 AC004877.2-201ENST00000623941 599 ntBASIC17.72■□□□□ 0.43
SCML4Q8N228 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCML4Q8N228 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCML4Q8N228 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.72■□□□□ 0.43
SCML4Q8N228 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SCML4Q8N228 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCML4Q8N228 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCML4Q8N228 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.72■□□□□ 0.43
SCML4Q8N228 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SCML4Q8N228 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SCML4Q8N228 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.71■□□□□ 0.43
SCML4Q8N228 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCML4Q8N228 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCML4Q8N228 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCML4Q8N228 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCML4Q8N228 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
SCML4Q8N228 BCL2-203ENST00000589955 5011 ntBASIC17.71■□□□□ 0.43
SCML4Q8N228 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCML4Q8N228 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCML4Q8N228 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCML4Q8N228 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCML4Q8N228 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SCML4Q8N228 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.71■□□□□ 0.43
SCML4Q8N228 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SCML4Q8N228 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCML4Q8N228 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SCML4Q8N228 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCML4Q8N228 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.71■□□□□ 0.43
SCML4Q8N228 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.71■□□□□ 0.43
SCML4Q8N228 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SCML4Q8N228 KRT19P2-202ENST00000557173 1012 ntBASIC17.71■□□□□ 0.43
SCML4Q8N228 PDPK2P-202ENST00000562415 1191 ntBASIC17.71■□□□□ 0.43
SCML4Q8N228 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCML4Q8N228 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCML4Q8N228 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
SCML4Q8N228 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SCML4Q8N228 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCML4Q8N228 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCML4Q8N228 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCML4Q8N228 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCML4Q8N228 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
SCML4Q8N228 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.71■□□□□ 0.42
SCML4Q8N228 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SCML4Q8N228 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
SCML4Q8N228 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SCML4Q8N228 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SCML4Q8N228 SLC22A20-204ENST00000530038 1673 ntBASIC17.71■□□□□ 0.42
SCML4Q8N228 AC060834.1-201ENST00000443027 2032 ntBASIC17.71■□□□□ 0.42
SCML4Q8N228 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SCML4Q8N228 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SCML4Q8N228 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms