Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RTTNQ86VV8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.17■□□□□ 0.02
RTTNQ86VV8 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.17■□□□□ 0.02
RTTNQ86VV8 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.17■□□□□ 0.02
RTTNQ86VV8 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RTTNQ86VV8 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.17■□□□□ 0.02
RTTNQ86VV8 AC019129.2-201ENST00000609837 1235 ntBASIC15.17■□□□□ 0.02
RTTNQ86VV8 AC114341.1-201ENST00000618070 349 ntBASIC15.17■□□□□ 0.02
RTTNQ86VV8 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.17■□□□□ 0.02
RTTNQ86VV8 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RTTNQ86VV8 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RTTNQ86VV8 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RTTNQ86VV8 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RTTNQ86VV8 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RTTNQ86VV8 AL662844.4-201ENST00000606367 2838 ntBASIC15.17■□□□□ 0.02
RTTNQ86VV8 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
RTTNQ86VV8 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RTTNQ86VV8 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RTTNQ86VV8 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTTNQ86VV8 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
RTTNQ86VV8 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTTNQ86VV8 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RTTNQ86VV8 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTTNQ86VV8 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RTTNQ86VV8 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTTNQ86VV8 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RTTNQ86VV8 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RTTNQ86VV8 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RTTNQ86VV8 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTTNQ86VV8 AC098831.1-202ENST00000438821 336 ntBASIC15.16■□□□□ 0.02
RTTNQ86VV8 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.16■□□□□ 0.02
RTTNQ86VV8 AC132008.2-207ENST00000454517 770 ntBASIC15.16■□□□□ 0.02
RTTNQ86VV8 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.16■□□□□ 0.02
RTTNQ86VV8 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.16■□□□□ 0.02
RTTNQ86VV8 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.16■□□□□ 0.02
RTTNQ86VV8 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.16■□□□□ 0.02
RTTNQ86VV8 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RTTNQ86VV8 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RTTNQ86VV8 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTTNQ86VV8 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RTTNQ86VV8 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RTTNQ86VV8 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTTNQ86VV8 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTTNQ86VV8 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RTTNQ86VV8 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
RTTNQ86VV8 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTTNQ86VV8 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTTNQ86VV8 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTTNQ86VV8 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
RTTNQ86VV8 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTTNQ86VV8 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTTNQ86VV8 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RTTNQ86VV8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RTTNQ86VV8 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTTNQ86VV8 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RTTNQ86VV8 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.16■□□□□ 0.02
RTTNQ86VV8 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.16■□□□□ 0.02
RTTNQ86VV8 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.16■□□□□ 0.02
RTTNQ86VV8 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.16■□□□□ 0.02
RTTNQ86VV8 MIR5100-201ENST00000579544 119 ntBASIC15.16■□□□□ 0.02
RTTNQ86VV8 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.16■□□□□ 0.02
RTTNQ86VV8 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.16■□□□□ 0.02
RTTNQ86VV8 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RTTNQ86VV8 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RTTNQ86VV8 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTTNQ86VV8 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.16■□□□□ 0.02
RTTNQ86VV8 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RTTNQ86VV8 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RTTNQ86VV8 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
RTTNQ86VV8 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RTTNQ86VV8 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RTTNQ86VV8 LINC02199-201ENST00000506655 2702 ntBASIC15.15■□□□□ 0.02
RTTNQ86VV8 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RTTNQ86VV8 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RTTNQ86VV8 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.15■□□□□ 0.02
RTTNQ86VV8 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RTTNQ86VV8 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
RTTNQ86VV8 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.15■□□□□ 0.02
RTTNQ86VV8 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RTTNQ86VV8 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.15■□□□□ 0.02
RTTNQ86VV8 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RTTNQ86VV8 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
RTTNQ86VV8 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.15■□□□□ 0.02
RTTNQ86VV8 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.15■□□□□ 0.02
RTTNQ86VV8 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RTTNQ86VV8 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RTTNQ86VV8 SLC25A1P3-201ENST00000395415 828 ntBASIC15.15■□□□□ 0.02
RTTNQ86VV8 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.15■□□□□ 0.02
RTTNQ86VV8 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.15■□□□□ 0.02
RTTNQ86VV8 UPF3AP3-201ENST00000420996 769 ntBASIC15.15■□□□□ 0.02
RTTNQ86VV8 AC106730.1-201ENST00000566722 1090 ntBASIC15.15■□□□□ 0.02
RTTNQ86VV8 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.15■□□□□ 0.02
RTTNQ86VV8 AC027601.4-201ENST00000611259 610 ntBASIC15.15■□□□□ 0.02
RTTNQ86VV8 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RTTNQ86VV8 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
RTTNQ86VV8 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RTTNQ86VV8 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RTTNQ86VV8 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RTTNQ86VV8 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RTTNQ86VV8 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms