Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRTM4Q86VH4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRTM4Q86VH4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.78■□□□□ 0.28
LRRTM4Q86VH4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.78■□□□□ 0.28
LRRTM4Q86VH4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LRRTM4Q86VH4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.78■□□□□ 0.28
LRRTM4Q86VH4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
LRRTM4Q86VH4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.78■□□□□ 0.28
LRRTM4Q86VH4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.78■□□□□ 0.28
LRRTM4Q86VH4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRRTM4Q86VH4 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.78■□□□□ 0.28
LRRTM4Q86VH4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRRTM4Q86VH4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRTM4Q86VH4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRTM4Q86VH4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRTM4Q86VH4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRTM4Q86VH4 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.78■□□□□ 0.28
LRRTM4Q86VH4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
LRRTM4Q86VH4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRTM4Q86VH4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.78■□□□□ 0.28
LRRTM4Q86VH4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRTM4Q86VH4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRTM4Q86VH4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRTM4Q86VH4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.78■□□□□ 0.28
LRRTM4Q86VH4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRRTM4Q86VH4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRTM4Q86VH4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRTM4Q86VH4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
LRRTM4Q86VH4 AC002310.6-201ENST00000624451 1377 ntBASIC16.77■□□□□ 0.28
LRRTM4Q86VH4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRTM4Q86VH4 AC139713.2-201ENST00000641328 2723 ntBASIC16.77■□□□□ 0.28
LRRTM4Q86VH4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRTM4Q86VH4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRTM4Q86VH4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
LRRTM4Q86VH4 AC129492.6-201ENST00000611383 1305 ntBASIC16.77■□□□□ 0.28
LRRTM4Q86VH4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
LRRTM4Q86VH4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
LRRTM4Q86VH4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRTM4Q86VH4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRRTM4Q86VH4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRTM4Q86VH4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRTM4Q86VH4 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.77■□□□□ 0.28
LRRTM4Q86VH4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
LRRTM4Q86VH4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.77■□□□□ 0.28
LRRTM4Q86VH4 IGLL3P-201ENST00000412472 434 ntBASIC16.77■□□□□ 0.28
LRRTM4Q86VH4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRRTM4Q86VH4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRRTM4Q86VH4 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.77■□□□□ 0.28
LRRTM4Q86VH4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRRTM4Q86VH4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.77■□□□□ 0.28
LRRTM4Q86VH4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.77■□□□□ 0.28
LRRTM4Q86VH4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRRTM4Q86VH4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRTM4Q86VH4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LRRTM4Q86VH4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.77■□□□□ 0.27
LRRTM4Q86VH4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRRTM4Q86VH4 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
LRRTM4Q86VH4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRRTM4Q86VH4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRRTM4Q86VH4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRRTM4Q86VH4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LRRTM4Q86VH4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRRTM4Q86VH4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
LRRTM4Q86VH4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRTM4Q86VH4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRTM4Q86VH4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.76■□□□□ 0.27
LRRTM4Q86VH4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.76■□□□□ 0.27
LRRTM4Q86VH4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRTM4Q86VH4 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.76■□□□□ 0.27
LRRTM4Q86VH4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRTM4Q86VH4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
LRRTM4Q86VH4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRTM4Q86VH4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LRRTM4Q86VH4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
LRRTM4Q86VH4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
LRRTM4Q86VH4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRRTM4Q86VH4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.76■□□□□ 0.27
LRRTM4Q86VH4 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
LRRTM4Q86VH4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.76■□□□□ 0.27
LRRTM4Q86VH4 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.76■□□□□ 0.27
LRRTM4Q86VH4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.76■□□□□ 0.27
LRRTM4Q86VH4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.76■□□□□ 0.27
LRRTM4Q86VH4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.76■□□□□ 0.27
LRRTM4Q86VH4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.76■□□□□ 0.27
LRRTM4Q86VH4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRTM4Q86VH4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.76■□□□□ 0.27
LRRTM4Q86VH4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.76■□□□□ 0.27
LRRTM4Q86VH4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.76■□□□□ 0.27
LRRTM4Q86VH4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRTM4Q86VH4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRRTM4Q86VH4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRRTM4Q86VH4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.76■□□□□ 0.27
LRRTM4Q86VH4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.76■□□□□ 0.27
LRRTM4Q86VH4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.76■□□□□ 0.27
LRRTM4Q86VH4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.76■□□□□ 0.27
LRRTM4Q86VH4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRTM4Q86VH4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
LRRTM4Q86VH4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.76■□□□□ 0.27
LRRTM4Q86VH4 FRMD8P1-201ENST00000440433 1524 ntBASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms