Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
USP50Q70EL3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP50Q70EL3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
USP50Q70EL3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.94■□□□□ 0.78
USP50Q70EL3 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP50Q70EL3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
USP50Q70EL3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC19.94■□□□□ 0.78
USP50Q70EL3 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP50Q70EL3 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC19.94■□□□□ 0.78
USP50Q70EL3 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC19.94■□□□□ 0.78
USP50Q70EL3 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC19.94■□□□□ 0.78
USP50Q70EL3 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19.94■□□□□ 0.78
USP50Q70EL3 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC19.94■□□□□ 0.78
USP50Q70EL3 AC105021.1-202ENST00000570572 669 ntBASIC19.94■□□□□ 0.78
USP50Q70EL3 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC19.94■□□□□ 0.78
USP50Q70EL3 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC19.94■□□□□ 0.78
USP50Q70EL3 AL033527.4-201ENST00000641026 673 ntBASIC19.94■□□□□ 0.78
USP50Q70EL3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.94■□□□□ 0.78
USP50Q70EL3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP50Q70EL3 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.94■□□□□ 0.78
USP50Q70EL3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
USP50Q70EL3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
USP50Q70EL3 LINC00895-201ENST00000629028 1637 ntBASIC19.94■□□□□ 0.78
USP50Q70EL3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP50Q70EL3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
USP50Q70EL3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP50Q70EL3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP50Q70EL3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP50Q70EL3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.93■□□□□ 0.78
USP50Q70EL3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19.93■□□□□ 0.78
USP50Q70EL3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
USP50Q70EL3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP50Q70EL3 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
USP50Q70EL3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.93■□□□□ 0.78
USP50Q70EL3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
USP50Q70EL3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.93■□□□□ 0.78
USP50Q70EL3 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC19.93■□□□□ 0.78
USP50Q70EL3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.93■□□□□ 0.78
USP50Q70EL3 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC19.93■□□□□ 0.78
USP50Q70EL3 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP50Q70EL3 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP50Q70EL3 AL080243.2-201ENST00000418783 582 ntBASIC19.93■□□□□ 0.78
USP50Q70EL3 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.93■□□□□ 0.78
USP50Q70EL3 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC19.93■□□□□ 0.78
USP50Q70EL3 RPL28-204ENST00000431533 590 ntTSL 2 BASIC19.93■□□□□ 0.78
USP50Q70EL3 RASL12-203ENST00000434605 982 ntTSL 2 BASIC19.93■□□□□ 0.78
USP50Q70EL3 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC19.93■□□□□ 0.78
USP50Q70EL3 RN7SL837P-201ENST00000463010 287 ntBASIC19.93■□□□□ 0.78
USP50Q70EL3 CD81-207ENST00000481687 890 ntTSL 2 BASIC19.93■□□□□ 0.78
USP50Q70EL3 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP50Q70EL3 AL079307.3-201ENST00000556114 283 ntBASIC19.93■□□□□ 0.78
USP50Q70EL3 RPL28-206ENST00000558752 671 ntTSL 3 BASIC19.93■□□□□ 0.78
USP50Q70EL3 MIR4525-201ENST00000580000 75 ntBASIC19.93■□□□□ 0.78
USP50Q70EL3 AL512343.1-201ENST00000605837 169 ntBASIC19.93■□□□□ 0.78
USP50Q70EL3 AL133215.2-201ENST00000609242 977 ntBASIC19.93■□□□□ 0.78
USP50Q70EL3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP50Q70EL3 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC19.93■□□□□ 0.78
USP50Q70EL3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP50Q70EL3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP50Q70EL3 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.93■□□□□ 0.78
USP50Q70EL3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
USP50Q70EL3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP50Q70EL3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
USP50Q70EL3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP50Q70EL3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP50Q70EL3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP50Q70EL3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.92■□□□□ 0.78
USP50Q70EL3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.92■□□□□ 0.78
USP50Q70EL3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP50Q70EL3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP50Q70EL3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP50Q70EL3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP50Q70EL3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC19.92■□□□□ 0.78
USP50Q70EL3 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP50Q70EL3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
USP50Q70EL3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
USP50Q70EL3 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP50Q70EL3 TTTY23B-201ENST00000442790 549 ntBASIC19.92■□□□□ 0.78
USP50Q70EL3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.92■□□□□ 0.78
USP50Q70EL3 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC19.92■□□□□ 0.78
USP50Q70EL3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
USP50Q70EL3 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.92■□□□□ 0.78
USP50Q70EL3 BANF1P1-201ENST00000553684 263 ntBASIC19.92■□□□□ 0.78
USP50Q70EL3 MIR4259-201ENST00000584466 101 ntBASIC19.92■□□□□ 0.78
USP50Q70EL3 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC19.92■□□□□ 0.78
USP50Q70EL3 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC19.92■□□□□ 0.78
USP50Q70EL3 AC099568.2-201ENST00000609194 695 ntBASIC19.92■□□□□ 0.78
USP50Q70EL3 LINC00896-202ENST00000609602 2128 ntBASIC19.92■□□□□ 0.78
USP50Q70EL3 SPTSSB-204ENST00000617024 1292 ntBASIC19.92■□□□□ 0.78
USP50Q70EL3 AC007431.3-201ENST00000623221 587 ntBASIC19.92■□□□□ 0.78
USP50Q70EL3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.92■□□□□ 0.78
USP50Q70EL3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
USP50Q70EL3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP50Q70EL3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP50Q70EL3 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP50Q70EL3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP50Q70EL3 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC19.92■□□□□ 0.78
USP50Q70EL3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.92■□□□□ 0.78
USP50Q70EL3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP50Q70EL3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms