Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.24■□□□□ 0.51
VSTM1Q6UX27 MIR940-201ENST00000401276 94 ntBASIC18.24■□□□□ 0.51
VSTM1Q6UX27 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.24■□□□□ 0.51
VSTM1Q6UX27 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.24■□□□□ 0.51
VSTM1Q6UX27 PRSS29P-201ENST00000440800 595 ntBASIC18.24■□□□□ 0.51
VSTM1Q6UX27 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
VSTM1Q6UX27 KRT18P3-201ENST00000451602 1288 ntBASIC18.24■□□□□ 0.51
VSTM1Q6UX27 AC108073.2-201ENST00000464002 357 ntBASIC18.24■□□□□ 0.51
VSTM1Q6UX27 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.24■□□□□ 0.51
VSTM1Q6UX27 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.24■□□□□ 0.51
VSTM1Q6UX27 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.24■□□□□ 0.51
VSTM1Q6UX27 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
VSTM1Q6UX27 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
VSTM1Q6UX27 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
VSTM1Q6UX27 AC023511.2-201ENST00000618803 211 ntBASIC18.24■□□□□ 0.51
VSTM1Q6UX27 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.24■□□□□ 0.51
VSTM1Q6UX27 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VSTM1Q6UX27 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
VSTM1Q6UX27 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
VSTM1Q6UX27 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VSTM1Q6UX27 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VSTM1Q6UX27 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VSTM1Q6UX27 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
VSTM1Q6UX27 HTR7P1-202ENST00000624664 4411 ntBASIC18.24■□□□□ 0.51
VSTM1Q6UX27 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VSTM1Q6UX27 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VSTM1Q6UX27 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.23■□□□□ 0.51
VSTM1Q6UX27 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VSTM1Q6UX27 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.23■□□□□ 0.51
VSTM1Q6UX27 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.23■□□□□ 0.51
VSTM1Q6UX27 CROCCP2-202ENST00000412962 2773 ntBASIC18.23■□□□□ 0.51
VSTM1Q6UX27 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.23■□□□□ 0.51
VSTM1Q6UX27 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.23■□□□□ 0.51
VSTM1Q6UX27 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.23■□□□□ 0.51
VSTM1Q6UX27 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VSTM1Q6UX27 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
VSTM1Q6UX27 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VSTM1Q6UX27 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
VSTM1Q6UX27 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.23■□□□□ 0.51
VSTM1Q6UX27 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.23■□□□□ 0.51
VSTM1Q6UX27 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.23■□□□□ 0.51
VSTM1Q6UX27 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.23■□□□□ 0.51
VSTM1Q6UX27 PGAM5P1-201ENST00000518923 814 ntBASIC18.23■□□□□ 0.51
VSTM1Q6UX27 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.23■□□□□ 0.51
VSTM1Q6UX27 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.23■□□□□ 0.51
VSTM1Q6UX27 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.23■□□□□ 0.51
VSTM1Q6UX27 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
VSTM1Q6UX27 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
VSTM1Q6UX27 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
VSTM1Q6UX27 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.23■□□□□ 0.51
VSTM1Q6UX27 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VSTM1Q6UX27 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VSTM1Q6UX27 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
VSTM1Q6UX27 AC018695.7-201ENST00000624587 2492 ntBASIC18.23■□□□□ 0.51
VSTM1Q6UX27 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VSTM1Q6UX27 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
VSTM1Q6UX27 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VSTM1Q6UX27 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
VSTM1Q6UX27 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
VSTM1Q6UX27 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.22■□□□□ 0.51
VSTM1Q6UX27 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
VSTM1Q6UX27 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.22■□□□□ 0.51
VSTM1Q6UX27 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VSTM1Q6UX27 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
VSTM1Q6UX27 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
VSTM1Q6UX27 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VSTM1Q6UX27 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
VSTM1Q6UX27 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
VSTM1Q6UX27 RNA5SP416-201ENST00000516838 111 ntBASIC18.22■□□□□ 0.51
VSTM1Q6UX27 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.22■□□□□ 0.51
VSTM1Q6UX27 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.22■□□□□ 0.51
VSTM1Q6UX27 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.22■□□□□ 0.51
VSTM1Q6UX27 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.22■□□□□ 0.51
VSTM1Q6UX27 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.22■□□□□ 0.51
VSTM1Q6UX27 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.22■□□□□ 0.51
VSTM1Q6UX27 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.22■□□□□ 0.51
VSTM1Q6UX27 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.22■□□□□ 0.51
VSTM1Q6UX27 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VSTM1Q6UX27 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.22■□□□□ 0.51
VSTM1Q6UX27 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.22■□□□□ 0.51
VSTM1Q6UX27 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
VSTM1Q6UX27 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VSTM1Q6UX27 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VSTM1Q6UX27 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VSTM1Q6UX27 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
VSTM1Q6UX27 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VSTM1Q6UX27 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VSTM1Q6UX27 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
VSTM1Q6UX27 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
VSTM1Q6UX27 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.22■□□□□ 0.51
VSTM1Q6UX27 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
VSTM1Q6UX27 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
VSTM1Q6UX27 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
VSTM1Q6UX27 AL138688.1-201ENST00000624851 1594 ntBASIC18.21■□□□□ 0.51
VSTM1Q6UX27 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VSTM1Q6UX27 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
VSTM1Q6UX27 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VSTM1Q6UX27 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
VSTM1Q6UX27 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.21■□□□□ 0.51
VSTM1Q6UX27 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms