Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 AL441883.1-201ENST00000566170 1045 ntBASIC16.57■□□□□ 0.24
RNF220Q5VTB9 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 AL136038.4-201ENST00000603606 1261 ntBASIC16.57■□□□□ 0.24
RNF220Q5VTB9 AC005363.2-201ENST00000618631 242 ntBASIC16.57■□□□□ 0.24
RNF220Q5VTB9 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RNF220Q5VTB9 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF220Q5VTB9 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF220Q5VTB9 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF220Q5VTB9 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF220Q5VTB9 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF220Q5VTB9 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF220Q5VTB9 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF220Q5VTB9 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF220Q5VTB9 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
RNF220Q5VTB9 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF220Q5VTB9 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF220Q5VTB9 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF220Q5VTB9 TERF1P1-201ENST00000311003 1181 ntBASIC16.56■□□□□ 0.24
RNF220Q5VTB9 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF220Q5VTB9 STARP1-201ENST00000397973 869 ntBASIC16.56■□□□□ 0.24
RNF220Q5VTB9 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
RNF220Q5VTB9 BX664615.1-201ENST00000443558 458 ntBASIC16.56■□□□□ 0.24
RNF220Q5VTB9 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF220Q5VTB9 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RNF220Q5VTB9 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF220Q5VTB9 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.56■□□□□ 0.24
RNF220Q5VTB9 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF220Q5VTB9 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF220Q5VTB9 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
RNF220Q5VTB9 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF220Q5VTB9 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RNF220Q5VTB9 AL391807.1-203ENST00000604392 2365 ntBASIC16.56■□□□□ 0.24
RNF220Q5VTB9 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF220Q5VTB9 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF220Q5VTB9 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF220Q5VTB9 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF220Q5VTB9 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF220Q5VTB9 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF220Q5VTB9 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF220Q5VTB9 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF220Q5VTB9 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF220Q5VTB9 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF220Q5VTB9 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF220Q5VTB9 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF220Q5VTB9 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF220Q5VTB9 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF220Q5VTB9 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF220Q5VTB9 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF220Q5VTB9 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF220Q5VTB9 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.55■□□□□ 0.24
RNF220Q5VTB9 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF220Q5VTB9 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF220Q5VTB9 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF220Q5VTB9 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF220Q5VTB9 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF220Q5VTB9 AL137013.1-201ENST00000432946 1228 ntBASIC16.55■□□□□ 0.24
RNF220Q5VTB9 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.55■□□□□ 0.24
RNF220Q5VTB9 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.55■□□□□ 0.24
RNF220Q5VTB9 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF220Q5VTB9 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RNF220Q5VTB9 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.55■□□□□ 0.24
RNF220Q5VTB9 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RNF220Q5VTB9 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF220Q5VTB9 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF220Q5VTB9 AC079602.3-201ENST00000623931 403 ntBASIC16.55■□□□□ 0.24
RNF220Q5VTB9 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RNF220Q5VTB9 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF220Q5VTB9 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF220Q5VTB9 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF220Q5VTB9 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF220Q5VTB9 AC100803.2-201ENST00000562459 1963 ntBASIC16.55■□□□□ 0.24
RNF220Q5VTB9 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF220Q5VTB9 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF220Q5VTB9 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF220Q5VTB9 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF220Q5VTB9 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF220Q5VTB9 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF220Q5VTB9 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF220Q5VTB9 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF220Q5VTB9 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms