Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 HLA-J-201ENST00000462773 1622 ntBASIC15.06■□□□□ 0
CHRFAM7AQ494W8 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHRFAM7AQ494W8 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHRFAM7AQ494W8 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
CHRFAM7AQ494W8 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHRFAM7AQ494W8 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.06■□□□□ 0
CHRFAM7AQ494W8 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.06■□□□□ 0
CHRFAM7AQ494W8 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CHRFAM7AQ494W8 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHRFAM7AQ494W8 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CHRFAM7AQ494W8 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CHRFAM7AQ494W8 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHRFAM7AQ494W8 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.06■□□□□ 0
CHRFAM7AQ494W8 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.06■□□□□ 0
CHRFAM7AQ494W8 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.06■□□□□ 0
CHRFAM7AQ494W8 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.06■□□□□ 0
CHRFAM7AQ494W8 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.06■□□□□ 0
CHRFAM7AQ494W8 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
CHRFAM7AQ494W8 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.06■□□□□ 0
CHRFAM7AQ494W8 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.06■□□□□ 0
CHRFAM7AQ494W8 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.06■□□□□ 0
CHRFAM7AQ494W8 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.06■□□□□ 0
CHRFAM7AQ494W8 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.06■□□□□ 0
CHRFAM7AQ494W8 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHRFAM7AQ494W8 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.06■□□□□ 0
CHRFAM7AQ494W8 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.06■□□□□ 0
CHRFAM7AQ494W8 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.06■□□□□ 0
CHRFAM7AQ494W8 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CHRFAM7AQ494W8 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.06■□□□□ 0
CHRFAM7AQ494W8 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHRFAM7AQ494W8 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.06■□□□□ 0
CHRFAM7AQ494W8 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CHRFAM7AQ494W8 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.05■□□□□ 0
CHRFAM7AQ494W8 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CHRFAM7AQ494W8 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
CHRFAM7AQ494W8 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
CHRFAM7AQ494W8 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
CHRFAM7AQ494W8 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CHRFAM7AQ494W8 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
CHRFAM7AQ494W8 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CHRFAM7AQ494W8 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.05■□□□□ -0
CHRFAM7AQ494W8 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CHRFAM7AQ494W8 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
CHRFAM7AQ494W8 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.05■□□□□ -0
CHRFAM7AQ494W8 RPL13AP23-201ENST00000480739 586 ntBASIC15.05■□□□□ -0
CHRFAM7AQ494W8 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.05■□□□□ -0
CHRFAM7AQ494W8 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.05■□□□□ -0
CHRFAM7AQ494W8 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CHRFAM7AQ494W8 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.05■□□□□ -0
CHRFAM7AQ494W8 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.05■□□□□ -0
CHRFAM7AQ494W8 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.05■□□□□ -0
CHRFAM7AQ494W8 AL691403.2-201ENST00000618460 490 ntBASIC15.05■□□□□ -0
CHRFAM7AQ494W8 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CHRFAM7AQ494W8 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ -0
CHRFAM7AQ494W8 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CHRFAM7AQ494W8 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CHRFAM7AQ494W8 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.05■□□□□ -0
CHRFAM7AQ494W8 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CHRFAM7AQ494W8 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CHRFAM7AQ494W8 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CHRFAM7AQ494W8 LINC00304-203ENST00000565008 1864 ntBASIC15.05■□□□□ -0
CHRFAM7AQ494W8 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.05■□□□□ -0
CHRFAM7AQ494W8 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
CHRFAM7AQ494W8 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CHRFAM7AQ494W8 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CHRFAM7AQ494W8 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.04■□□□□ -0
CHRFAM7AQ494W8 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CHRFAM7AQ494W8 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.04■□□□□ -0
CHRFAM7AQ494W8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CHRFAM7AQ494W8 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CHRFAM7AQ494W8 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.04■□□□□ -0
CHRFAM7AQ494W8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.04■□□□□ -0
CHRFAM7AQ494W8 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CHRFAM7AQ494W8 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CHRFAM7AQ494W8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CHRFAM7AQ494W8 AC132938.6-201ENST00000623828 1655 ntBASIC15.04■□□□□ -0
CHRFAM7AQ494W8 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CHRFAM7AQ494W8 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CHRFAM7AQ494W8 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CHRFAM7AQ494W8 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CHRFAM7AQ494W8 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.04■□□□□ -0
CHRFAM7AQ494W8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.04■□□□□ -0
CHRFAM7AQ494W8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CHRFAM7AQ494W8 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.04■□□□□ -0
CHRFAM7AQ494W8 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CHRFAM7AQ494W8 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.04■□□□□ -0
CHRFAM7AQ494W8 AC005104.2-201ENST00000427818 678 ntBASIC15.04■□□□□ -0
CHRFAM7AQ494W8 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.04■□□□□ -0
CHRFAM7AQ494W8 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
CHRFAM7AQ494W8 RN7SL606P-201ENST00000472779 293 ntBASIC15.04■□□□□ -0
CHRFAM7AQ494W8 AC073648.2-201ENST00000510116 352 ntBASIC15.04■□□□□ -0
CHRFAM7AQ494W8 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.04■□□□□ -0
CHRFAM7AQ494W8 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.04■□□□□ -0
CHRFAM7AQ494W8 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.04■□□□□ -0
CHRFAM7AQ494W8 AC139887.3-201ENST00000568585 713 ntBASIC15.04■□□□□ -0
CHRFAM7AQ494W8 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.04■□□□□ -0
CHRFAM7AQ494W8 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.04■□□□□ -0
CHRFAM7AQ494W8 AC008687.5-201ENST00000593746 558 ntBASIC15.04■□□□□ -0
CHRFAM7AQ494W8 AC024563.2-201ENST00000603282 481 ntBASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms