Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM71Q2Q1W2 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM71Q2Q1W2 MIR346-201ENST00000362234 95 ntBASIC18.56■□□□□ 0.56
TRIM71Q2Q1W2 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM71Q2Q1W2 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM71Q2Q1W2 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.56■□□□□ 0.56
TRIM71Q2Q1W2 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM71Q2Q1W2 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.56■□□□□ 0.56
TRIM71Q2Q1W2 AC236430.1-201ENST00000402231 743 ntBASIC18.56■□□□□ 0.56
TRIM71Q2Q1W2 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
TRIM71Q2Q1W2 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.56■□□□□ 0.56
TRIM71Q2Q1W2 TREML5P-201ENST00000421694 576 ntBASIC18.56■□□□□ 0.56
TRIM71Q2Q1W2 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM71Q2Q1W2 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM71Q2Q1W2 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.56■□□□□ 0.56
TRIM71Q2Q1W2 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TRIM71Q2Q1W2 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.56■□□□□ 0.56
TRIM71Q2Q1W2 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM71Q2Q1W2 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM71Q2Q1W2 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
TRIM71Q2Q1W2 AC091167.2-201ENST00000579581 588 ntBASIC18.56■□□□□ 0.56
TRIM71Q2Q1W2 AL031055.1-201ENST00000606362 631 ntBASIC18.56■□□□□ 0.56
TRIM71Q2Q1W2 AF228730.6-201ENST00000641497 218 ntBASIC18.56■□□□□ 0.56
TRIM71Q2Q1W2 AC084121.3-201ENST00000641716 218 ntBASIC18.56■□□□□ 0.56
TRIM71Q2Q1W2 AC105233.6-201ENST00000642093 218 ntBASIC18.56■□□□□ 0.56
TRIM71Q2Q1W2 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM71Q2Q1W2 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.56■□□□□ 0.56
TRIM71Q2Q1W2 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM71Q2Q1W2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM71Q2Q1W2 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM71Q2Q1W2 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM71Q2Q1W2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM71Q2Q1W2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 TOP3BP1-201ENST00000420768 1380 ntBASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 EGFEM1P-202ENST00000431685 1563 ntBASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 AP000842.3-202ENST00000569238 1080 ntBASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 MIR3909-201ENST00000579518 119 ntBASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM71Q2Q1W2 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.54■□□□□ 0.56
TRIM71Q2Q1W2 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM71Q2Q1W2 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM71Q2Q1W2 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.54■□□□□ 0.56
TRIM71Q2Q1W2 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM71Q2Q1W2 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.54■□□□□ 0.56
TRIM71Q2Q1W2 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM71Q2Q1W2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM71Q2Q1W2 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.54■□□□□ 0.56
TRIM71Q2Q1W2 AC015922.1-201ENST00000421102 1152 ntBASIC18.54■□□□□ 0.56
TRIM71Q2Q1W2 TSPY16P-201ENST00000449843 468 ntBASIC18.54■□□□□ 0.56
TRIM71Q2Q1W2 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.54■□□□□ 0.56
TRIM71Q2Q1W2 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.54■□□□□ 0.56
TRIM71Q2Q1W2 ALG1L8P-201ENST00000533887 760 ntBASIC18.54■□□□□ 0.56
TRIM71Q2Q1W2 AC190387.1-201ENST00000551683 408 ntBASIC18.54■□□□□ 0.56
TRIM71Q2Q1W2 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.54■□□□□ 0.56
TRIM71Q2Q1W2 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM71Q2Q1W2 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.54■□□□□ 0.56
TRIM71Q2Q1W2 AC008267.7-201ENST00000624570 1194 ntBASIC18.54■□□□□ 0.56
TRIM71Q2Q1W2 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
TRIM71Q2Q1W2 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.54■□□□□ 0.56
TRIM71Q2Q1W2 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM71Q2Q1W2 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TRIM71Q2Q1W2 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM71Q2Q1W2 GNAS-203ENST00000306120 1878 ntBASIC18.54■□□□□ 0.56
TRIM71Q2Q1W2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms