Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATP2B3Q16720 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.94■□□□□ 0.94
ATP2B3Q16720 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP2B3Q16720 CROCCP2-202ENST00000412962 2773 ntBASIC20.94■□□□□ 0.94
ATP2B3Q16720 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP2B3Q16720 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
ATP2B3Q16720 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP2B3Q16720 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP2B3Q16720 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP2B3Q16720 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
ATP2B3Q16720 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.94■□□□□ 0.94
ATP2B3Q16720 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP2B3Q16720 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.94■□□□□ 0.94
ATP2B3Q16720 LINC00896-202ENST00000609602 2128 ntBASIC20.94■□□□□ 0.94
ATP2B3Q16720 AC007064.4-201ENST00000637740 555 ntBASIC20.94■□□□□ 0.94
ATP2B3Q16720 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATP2B3Q16720 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP2B3Q16720 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.94■□□□□ 0.94
ATP2B3Q16720 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.94■□□□□ 0.94
ATP2B3Q16720 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
ATP2B3Q16720 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP2B3Q16720 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2B3Q16720 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
ATP2B3Q16720 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.93■□□□□ 0.94
ATP2B3Q16720 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
ATP2B3Q16720 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2B3Q16720 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC20.93■□□□□ 0.94
ATP2B3Q16720 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
ATP2B3Q16720 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2B3Q16720 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2B3Q16720 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
ATP2B3Q16720 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2B3Q16720 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2B3Q16720 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2B3Q16720 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
ATP2B3Q16720 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.93■□□□□ 0.94
ATP2B3Q16720 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2B3Q16720 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.93■□□□□ 0.94
ATP2B3Q16720 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.93■□□□□ 0.94
ATP2B3Q16720 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2B3Q16720 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.93■□□□□ 0.94
ATP2B3Q16720 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.93■□□□□ 0.94
ATP2B3Q16720 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.93■□□□□ 0.94
ATP2B3Q16720 AL691403.2-201ENST00000618460 490 ntBASIC20.93■□□□□ 0.94
ATP2B3Q16720 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2B3Q16720 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
ATP2B3Q16720 AC011270.2-201ENST00000624293 2550 ntBASIC20.93■□□□□ 0.94
ATP2B3Q16720 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2B3Q16720 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2B3Q16720 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
ATP2B3Q16720 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2B3Q16720 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2B3Q16720 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2B3Q16720 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.93■□□□□ 0.94
ATP2B3Q16720 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.93■□□□□ 0.94
ATP2B3Q16720 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2B3Q16720 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2B3Q16720 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2B3Q16720 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2B3Q16720 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2B3Q16720 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
ATP2B3Q16720 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2B3Q16720 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2B3Q16720 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
ATP2B3Q16720 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2B3Q16720 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2B3Q16720 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
ATP2B3Q16720 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
ATP2B3Q16720 AL513480.1-201ENST00000451731 511 ntBASIC20.92■□□□□ 0.94
ATP2B3Q16720 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.92■□□□□ 0.94
ATP2B3Q16720 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
ATP2B3Q16720 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.92■□□□□ 0.94
ATP2B3Q16720 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.92■□□□□ 0.94
ATP2B3Q16720 AL078644.1-201ENST00000609881 752 ntBASIC20.92■□□□□ 0.94
ATP2B3Q16720 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.92■□□□□ 0.94
ATP2B3Q16720 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC20.92■□□□□ 0.94
ATP2B3Q16720 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC20.92■□□□□ 0.94
ATP2B3Q16720 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.92■□□□□ 0.94
ATP2B3Q16720 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
ATP2B3Q16720 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.92■□□□□ 0.94
ATP2B3Q16720 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2B3Q16720 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2B3Q16720 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.92■□□□□ 0.94
ATP2B3Q16720 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2B3Q16720 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2B3Q16720 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC20.92■□□□□ 0.94
ATP2B3Q16720 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2B3Q16720 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.92■□□□□ 0.94
ATP2B3Q16720 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2B3Q16720 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2B3Q16720 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
ATP2B3Q16720 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.92■□□□□ 0.94
ATP2B3Q16720 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.91■□□□□ 0.94
ATP2B3Q16720 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2B3Q16720 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2B3Q16720 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2B3Q16720 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2B3Q16720 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2B3Q16720 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2B3Q16720 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms