Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SSRP1Q08945 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SSRP1Q08945 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSRP1Q08945 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
SSRP1Q08945 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SSRP1Q08945 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SSRP1Q08945 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SSRP1Q08945 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SSRP1Q08945 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSRP1Q08945 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
SSRP1Q08945 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SSRP1Q08945 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSRP1Q08945 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSRP1Q08945 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SSRP1Q08945 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SSRP1Q08945 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.87■□□□□ 0.77
SSRP1Q08945 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.87■□□□□ 0.77
SSRP1Q08945 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.87■□□□□ 0.77
SSRP1Q08945 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.87■□□□□ 0.77
SSRP1Q08945 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.87■□□□□ 0.77
SSRP1Q08945 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.87■□□□□ 0.77
SSRP1Q08945 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.87■□□□□ 0.77
SSRP1Q08945 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.87■□□□□ 0.77
SSRP1Q08945 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.87■□□□□ 0.77
SSRP1Q08945 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SSRP1Q08945 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.87■□□□□ 0.77
SSRP1Q08945 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSRP1Q08945 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SSRP1Q08945 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSRP1Q08945 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSRP1Q08945 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SSRP1Q08945 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSRP1Q08945 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
SSRP1Q08945 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSRP1Q08945 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SSRP1Q08945 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSRP1Q08945 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSRP1Q08945 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.86■□□□□ 0.77
SSRP1Q08945 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSRP1Q08945 AC243591.1-201ENST00000452967 1364 ntBASIC19.86■□□□□ 0.77
SSRP1Q08945 OR6D1P-203ENST00000641209 4860 ntBASIC19.86■□□□□ 0.77
SSRP1Q08945 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSRP1Q08945 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.86■□□□□ 0.77
SSRP1Q08945 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSRP1Q08945 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SSRP1Q08945 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSRP1Q08945 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSRP1Q08945 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSRP1Q08945 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SSRP1Q08945 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.86■□□□□ 0.77
SSRP1Q08945 FAAHP1-202ENST00000446499 1238 ntBASIC19.86■□□□□ 0.77
SSRP1Q08945 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.86■□□□□ 0.77
SSRP1Q08945 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SSRP1Q08945 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSRP1Q08945 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.86■□□□□ 0.77
SSRP1Q08945 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.86■□□□□ 0.77
SSRP1Q08945 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.86■□□□□ 0.77
SSRP1Q08945 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.86■□□□□ 0.77
SSRP1Q08945 AL031008.1-201ENST00000619963 541 ntBASIC19.86■□□□□ 0.77
SSRP1Q08945 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.86■□□□□ 0.77
SSRP1Q08945 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.86■□□□□ 0.77
SSRP1Q08945 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.86■□□□□ 0.77
SSRP1Q08945 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
SSRP1Q08945 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SSRP1Q08945 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSRP1Q08945 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
SSRP1Q08945 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SSRP1Q08945 AC105020.1-201ENST00000435356 2205 ntBASIC19.86■□□□□ 0.77
SSRP1Q08945 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSRP1Q08945 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.86■□□□□ 0.77
SSRP1Q08945 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
SSRP1Q08945 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SSRP1Q08945 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSRP1Q08945 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SSRP1Q08945 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSRP1Q08945 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SSRP1Q08945 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SSRP1Q08945 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.85■□□□□ 0.77
SSRP1Q08945 AP002414.1-201ENST00000391405 1147 ntBASIC19.85■□□□□ 0.77
SSRP1Q08945 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSRP1Q08945 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SSRP1Q08945 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.85■□□□□ 0.77
SSRP1Q08945 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.85■□□□□ 0.77
SSRP1Q08945 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
SSRP1Q08945 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.85■□□□□ 0.77
SSRP1Q08945 AC006557.2-201ENST00000592985 1240 ntBASIC19.85■□□□□ 0.77
SSRP1Q08945 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
SSRP1Q08945 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSRP1Q08945 AC006504.4-201ENST00000592118 1568 ntBASIC19.85■□□□□ 0.77
SSRP1Q08945 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.85■□□□□ 0.77
SSRP1Q08945 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SSRP1Q08945 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.85■□□□□ 0.77
SSRP1Q08945 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.85■□□□□ 0.77
SSRP1Q08945 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.85■□□□□ 0.77
SSRP1Q08945 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SSRP1Q08945 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
SSRP1Q08945 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSRP1Q08945 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SSRP1Q08945 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.84■□□□□ 0.77
SSRP1Q08945 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms