Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3F3AP84243 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.32■□□□□ 0.04
H3F3AP84243 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
H3F3AP84243 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.32■□□□□ 0.04
H3F3AP84243 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.32■□□□□ 0.04
H3F3AP84243 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.32■□□□□ 0.04
H3F3AP84243 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
H3F3AP84243 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.32■□□□□ 0.04
H3F3AP84243 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.32■□□□□ 0.04
H3F3AP84243 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.32■□□□□ 0.04
H3F3AP84243 AL049840.3-201ENST00000602669 611 ntBASIC15.32■□□□□ 0.04
H3F3AP84243 AL356488.2-201ENST00000602755 427 ntBASIC15.32■□□□□ 0.04
H3F3AP84243 MIR7706-201ENST00000613747 67 ntBASIC15.32■□□□□ 0.04
H3F3AP84243 AF228730.7-201ENST00000641842 219 ntBASIC15.32■□□□□ 0.04
H3F3AP84243 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3F3AP84243 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.32■□□□□ 0.04
H3F3AP84243 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
H3F3AP84243 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3F3AP84243 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
H3F3AP84243 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
H3F3AP84243 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3F3AP84243 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3F3AP84243 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3F3AP84243 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3F3AP84243 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
H3F3AP84243 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3F3AP84243 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3F3AP84243 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
H3F3AP84243 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
H3F3AP84243 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.31■□□□□ 0.04
H3F3AP84243 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
H3F3AP84243 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
H3F3AP84243 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.31■□□□□ 0.04
H3F3AP84243 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H3F3AP84243 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H3F3AP84243 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.31■□□□□ 0.04
H3F3AP84243 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
H3F3AP84243 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H3F3AP84243 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.31■□□□□ 0.04
H3F3AP84243 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.31■□□□□ 0.04
H3F3AP84243 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.31■□□□□ 0.04
H3F3AP84243 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
H3F3AP84243 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
H3F3AP84243 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H3F3AP84243 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
H3F3AP84243 AP002414.3-201ENST00000589352 1468 ntBASIC15.31■□□□□ 0.04
H3F3AP84243 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
H3F3AP84243 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
H3F3AP84243 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
H3F3AP84243 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
H3F3AP84243 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
H3F3AP84243 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H3F3AP84243 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
H3F3AP84243 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
H3F3AP84243 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.3■□□□□ 0.04
H3F3AP84243 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
H3F3AP84243 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H3F3AP84243 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
H3F3AP84243 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
H3F3AP84243 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H3F3AP84243 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
H3F3AP84243 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
H3F3AP84243 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
H3F3AP84243 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.3■□□□□ 0.04
H3F3AP84243 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.3■□□□□ 0.04
H3F3AP84243 AC026396.1-201ENST00000419388 421 ntBASIC15.3■□□□□ 0.04
H3F3AP84243 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.3■□□□□ 0.04
H3F3AP84243 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
H3F3AP84243 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
H3F3AP84243 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
H3F3AP84243 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
H3F3AP84243 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.3■□□□□ 0.04
H3F3AP84243 RPS15P9-201ENST00000494093 319 ntBASIC15.3■□□□□ 0.04
H3F3AP84243 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.3■□□□□ 0.04
H3F3AP84243 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.3■□□□□ 0.04
H3F3AP84243 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.3■□□□□ 0.04
H3F3AP84243 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H3F3AP84243 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
H3F3AP84243 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
H3F3AP84243 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.3■□□□□ 0.04
H3F3AP84243 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.3■□□□□ 0.04
H3F3AP84243 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.3■□□□□ 0.04
H3F3AP84243 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
H3F3AP84243 AC008667.4-201ENST00000607370 168 ntBASIC15.3■□□□□ 0.04
H3F3AP84243 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
H3F3AP84243 MIR1199-201ENST00000621445 119 ntBASIC15.3■□□□□ 0.04
H3F3AP84243 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.3■□□□□ 0.04
H3F3AP84243 AC116407.3-201ENST00000623905 1129 ntBASIC15.3■□□□□ 0.04
H3F3AP84243 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.3■□□□□ 0.04
H3F3AP84243 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
H3F3AP84243 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H3F3AP84243 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
H3F3AP84243 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
H3F3AP84243 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H3F3AP84243 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.29■□□□□ 0.04
H3F3AP84243 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
H3F3AP84243 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3F3AP84243 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3F3AP84243 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3F3AP84243 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms