Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CX3CL1P78423 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CX3CL1P78423 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CX3CL1P78423 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CX3CL1P78423 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC13.86□□□□□ -0.19
CX3CL1P78423 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CX3CL1P78423 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.86□□□□□ -0.19
CX3CL1P78423 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CX3CL1P78423 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CX3CL1P78423 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CX3CL1P78423 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CL1P78423 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CL1P78423 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CL1P78423 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CL1P78423 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.85□□□□□ -0.19
CX3CL1P78423 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC13.85□□□□□ -0.19
CX3CL1P78423 AC046185.3-201ENST00000623228 1824 ntBASIC13.85□□□□□ -0.19
CX3CL1P78423 AC132938.5-201ENST00000624980 1813 ntBASIC13.85□□□□□ -0.19
CX3CL1P78423 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CL1P78423 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CX3CL1P78423 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CX3CL1P78423 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CL1P78423 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CL1P78423 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CL1P78423 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CL1P78423 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.85□□□□□ -0.19
CX3CL1P78423 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC13.85□□□□□ -0.19
CX3CL1P78423 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.85□□□□□ -0.19
CX3CL1P78423 PMPCAP1-201ENST00000508114 1576 ntBASIC13.85□□□□□ -0.19
CX3CL1P78423 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CL1P78423 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.85□□□□□ -0.19
CX3CL1P78423 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CL1P78423 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC13.85□□□□□ -0.19
CX3CL1P78423 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CX3CL1P78423 AC016396.2-201ENST00000562575 1417 ntBASIC13.85□□□□□ -0.19
CX3CL1P78423 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CX3CL1P78423 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CL1P78423 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CL1P78423 SOD2-201ENST00000337404 991 ntTSL 2 BASIC13.85□□□□□ -0.19
CX3CL1P78423 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CX3CL1P78423 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.85□□□□□ -0.19
CX3CL1P78423 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CL1P78423 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC13.85□□□□□ -0.19
CX3CL1P78423 TSPY19P-201ENST00000418461 509 ntBASIC13.85□□□□□ -0.19
CX3CL1P78423 TSPY18P-201ENST00000441642 509 ntBASIC13.85□□□□□ -0.19
CX3CL1P78423 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CX3CL1P78423 AC132008.2-207ENST00000454517 770 ntBASIC13.85□□□□□ -0.19
CX3CL1P78423 KRT18P31-201ENST00000506277 1292 ntBASIC13.85□□□□□ -0.19
CX3CL1P78423 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13.85□□□□□ -0.19
CX3CL1P78423 STK19B-204ENST00000512515 211 ntBASIC13.85□□□□□ -0.19
CX3CL1P78423 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC13.85□□□□□ -0.19
CX3CL1P78423 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC13.85□□□□□ -0.19
CX3CL1P78423 TPM1-218ENST00000559281 851 ntTSL 5 BASIC13.85□□□□□ -0.19
CX3CL1P78423 AC091304.2-201ENST00000564639 760 ntBASIC13.85□□□□□ -0.19
CX3CL1P78423 CLEC4GP1-201ENST00000596555 870 ntBASIC13.85□□□□□ -0.19
CX3CL1P78423 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CL1P78423 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC13.85□□□□□ -0.19
CX3CL1P78423 AP000867.4-201ENST00000641616 219 ntBASIC13.85□□□□□ -0.19
CX3CL1P78423 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CL1P78423 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.85□□□□□ -0.19
CX3CL1P78423 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CX3CL1P78423 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CL1P78423 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CX3CL1P78423 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CL1P78423 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CL1P78423 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CX3CL1P78423 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CX3CL1P78423 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CX3CL1P78423 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC13.84□□□□□ -0.19
CX3CL1P78423 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC13.84□□□□□ -0.19
CX3CL1P78423 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.84□□□□□ -0.19
CX3CL1P78423 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CX3CL1P78423 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
CX3CL1P78423 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CX3CL1P78423 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CX3CL1P78423 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CX3CL1P78423 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.84□□□□□ -0.19
CX3CL1P78423 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CX3CL1P78423 KLF4P1-201ENST00000412782 1185 ntBASIC13.84□□□□□ -0.19
CX3CL1P78423 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC13.84□□□□□ -0.19
CX3CL1P78423 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13.84□□□□□ -0.19
CX3CL1P78423 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CX3CL1P78423 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.84□□□□□ -0.19
CX3CL1P78423 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC13.84□□□□□ -0.19
CX3CL1P78423 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.84□□□□□ -0.19
CX3CL1P78423 LINC01711-201ENST00000598340 967 ntBASIC13.84□□□□□ -0.19
CX3CL1P78423 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC13.84□□□□□ -0.19
CX3CL1P78423 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CX3CL1P78423 UBALD1-205ENST00000590891 2641 ntBASIC13.84□□□□□ -0.19
CX3CL1P78423 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CX3CL1P78423 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CX3CL1P78423 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CX3CL1P78423 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CX3CL1P78423 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CX3CL1P78423 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.84□□□□□ -0.19
CX3CL1P78423 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
CX3CL1P78423 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CX3CL1P78423 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.83□□□□□ -0.19
CX3CL1P78423 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
CX3CL1P78423 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms