Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.7□□□□□ -0.06
ABCA4P78363 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.7□□□□□ -0.06
ABCA4P78363 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ABCA4P78363 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ABCA4P78363 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.7□□□□□ -0.06
ABCA4P78363 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ABCA4P78363 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ABCA4P78363 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
ABCA4P78363 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ABCA4P78363 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.7□□□□□ -0.06
ABCA4P78363 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ABCA4P78363 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ABCA4P78363 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.7□□□□□ -0.06
ABCA4P78363 AC090164.3-201ENST00000610780 2143 ntBASIC14.7□□□□□ -0.06
ABCA4P78363 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.7□□□□□ -0.06
ABCA4P78363 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
ABCA4P78363 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ABCA4P78363 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.7□□□□□ -0.06
ABCA4P78363 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ABCA4P78363 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
ABCA4P78363 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
ABCA4P78363 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ABCA4P78363 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.7□□□□□ -0.06
ABCA4P78363 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ABCA4P78363 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA4P78363 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA4P78363 AC002056.1-201ENST00000395613 760 ntBASIC14.69□□□□□ -0.06
ABCA4P78363 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.69□□□□□ -0.06
ABCA4P78363 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.69□□□□□ -0.06
ABCA4P78363 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA4P78363 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.69□□□□□ -0.06
ABCA4P78363 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.69□□□□□ -0.06
ABCA4P78363 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.69□□□□□ -0.06
ABCA4P78363 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA4P78363 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.69□□□□□ -0.06
ABCA4P78363 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA4P78363 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14.69□□□□□ -0.06
ABCA4P78363 RNF165-205ENST00000588679 2904 ntBASIC14.69□□□□□ -0.06
ABCA4P78363 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14.69□□□□□ -0.06
ABCA4P78363 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA4P78363 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA4P78363 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.69□□□□□ -0.06
ABCA4P78363 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA4P78363 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA4P78363 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC14.69□□□□□ -0.06
ABCA4P78363 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
ABCA4P78363 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
ABCA4P78363 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.69□□□□□ -0.06
ABCA4P78363 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA4P78363 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC14.69□□□□□ -0.06
ABCA4P78363 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA4P78363 GK-202ENST00000378941 458 ntTSL 3 BASIC14.69□□□□□ -0.06
ABCA4P78363 AC236430.1-201ENST00000402231 743 ntBASIC14.69□□□□□ -0.06
ABCA4P78363 HMGA1P7-201ENST00000406908 502 ntBASIC14.69□□□□□ -0.06
ABCA4P78363 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.69□□□□□ -0.06
ABCA4P78363 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.69□□□□□ -0.06
ABCA4P78363 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.69□□□□□ -0.06
ABCA4P78363 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.69□□□□□ -0.06
ABCA4P78363 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.69□□□□□ -0.06
ABCA4P78363 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.69□□□□□ -0.06
ABCA4P78363 AC243562.1-201ENST00000560672 389 ntBASIC14.69□□□□□ -0.06
ABCA4P78363 AC140878.1-201ENST00000565277 250 ntBASIC14.69□□□□□ -0.06
ABCA4P78363 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA4P78363 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.69□□□□□ -0.06
ABCA4P78363 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.69□□□□□ -0.06
ABCA4P78363 REXO1L3P-201ENST00000622202 1288 ntBASIC14.69□□□□□ -0.06
ABCA4P78363 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
ABCA4P78363 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA4P78363 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA4P78363 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
ABCA4P78363 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
ABCA4P78363 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.69□□□□□ -0.06
ABCA4P78363 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA4P78363 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA4P78363 AL355312.1-201ENST00000407115 2176 ntBASIC14.69□□□□□ -0.06
ABCA4P78363 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA4P78363 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.69□□□□□ -0.06
ABCA4P78363 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
ABCA4P78363 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
ABCA4P78363 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ABCA4P78363 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
ABCA4P78363 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.68□□□□□ -0.06
ABCA4P78363 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
ABCA4P78363 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.68□□□□□ -0.06
ABCA4P78363 AC140658.5-201ENST00000438532 169 ntBASIC14.68□□□□□ -0.06
ABCA4P78363 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.68□□□□□ -0.06
ABCA4P78363 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.68□□□□□ -0.06
ABCA4P78363 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.68□□□□□ -0.06
ABCA4P78363 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ABCA4P78363 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ABCA4P78363 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ABCA4P78363 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC14.68□□□□□ -0.06
ABCA4P78363 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.68□□□□□ -0.06
ABCA4P78363 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ABCA4P78363 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.68□□□□□ -0.06
ABCA4P78363 NEFHP1-201ENST00000412845 2629 ntBASIC14.68□□□□□ -0.06
ABCA4P78363 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ABCA4P78363 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ABCA4P78363 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ABCA4P78363 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms