Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.72■□□□□ 0.27
YBX1P67809 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
YBX1P67809 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.72■□□□□ 0.27
YBX1P67809 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
YBX1P67809 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.72■□□□□ 0.27
YBX1P67809 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.72■□□□□ 0.27
YBX1P67809 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
YBX1P67809 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
YBX1P67809 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
YBX1P67809 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
YBX1P67809 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
YBX1P67809 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.71■□□□□ 0.27
YBX1P67809 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.71■□□□□ 0.27
YBX1P67809 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
YBX1P67809 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
YBX1P67809 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
YBX1P67809 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
YBX1P67809 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
YBX1P67809 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
YBX1P67809 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.71■□□□□ 0.27
YBX1P67809 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
YBX1P67809 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
YBX1P67809 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
YBX1P67809 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.71■□□□□ 0.27
YBX1P67809 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
YBX1P67809 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
YBX1P67809 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
YBX1P67809 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
YBX1P67809 FDX1P1-201ENST00000449115 551 ntBASIC16.71■□□□□ 0.27
YBX1P67809 SCARNA2-201ENST00000458748 420 ntBASIC16.71■□□□□ 0.27
YBX1P67809 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
YBX1P67809 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
YBX1P67809 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.71■□□□□ 0.27
YBX1P67809 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.71■□□□□ 0.27
YBX1P67809 AC012640.2-201ENST00000561606 901 ntBASIC16.71■□□□□ 0.27
YBX1P67809 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.71■□□□□ 0.27
YBX1P67809 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
YBX1P67809 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
YBX1P67809 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
YBX1P67809 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
YBX1P67809 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
YBX1P67809 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
YBX1P67809 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
YBX1P67809 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
YBX1P67809 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
YBX1P67809 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
YBX1P67809 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.71■□□□□ 0.26
YBX1P67809 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.71■□□□□ 0.26
YBX1P67809 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
YBX1P67809 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
YBX1P67809 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
YBX1P67809 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
YBX1P67809 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
YBX1P67809 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
YBX1P67809 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
YBX1P67809 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
YBX1P67809 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.7■□□□□ 0.26
YBX1P67809 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
YBX1P67809 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
YBX1P67809 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
YBX1P67809 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
YBX1P67809 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
YBX1P67809 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
YBX1P67809 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.7■□□□□ 0.26
YBX1P67809 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
YBX1P67809 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.7■□□□□ 0.26
YBX1P67809 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.7■□□□□ 0.26
YBX1P67809 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
YBX1P67809 AC026396.1-201ENST00000419388 421 ntBASIC16.7■□□□□ 0.26
YBX1P67809 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
YBX1P67809 KRT18P67-201ENST00000432816 1264 ntBASIC16.7■□□□□ 0.26
YBX1P67809 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.7■□□□□ 0.26
YBX1P67809 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
YBX1P67809 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.7■□□□□ 0.26
YBX1P67809 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
YBX1P67809 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.7■□□□□ 0.26
YBX1P67809 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
YBX1P67809 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.7■□□□□ 0.26
YBX1P67809 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.7■□□□□ 0.26
YBX1P67809 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.7■□□□□ 0.26
YBX1P67809 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.7■□□□□ 0.26
YBX1P67809 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.7■□□□□ 0.26
YBX1P67809 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.7■□□□□ 0.26
YBX1P67809 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.7■□□□□ 0.26
YBX1P67809 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
YBX1P67809 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
YBX1P67809 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.7■□□□□ 0.26
YBX1P67809 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
YBX1P67809 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.7■□□□□ 0.26
YBX1P67809 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
YBX1P67809 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
YBX1P67809 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
YBX1P67809 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
YBX1P67809 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
YBX1P67809 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
YBX1P67809 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
YBX1P67809 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
YBX1P67809 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
YBX1P67809 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
YBX1P67809 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms