Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SNRPEP62304 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNRPEP62304 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.13□□□□□ -0.31
SNRPEP62304 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.13□□□□□ -0.31
SNRPEP62304 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNRPEP62304 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC13.13□□□□□ -0.31
SNRPEP62304 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC13.13□□□□□ -0.31
SNRPEP62304 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNRPEP62304 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SNRPEP62304 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNRPEP62304 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNRPEP62304 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.13□□□□□ -0.31
SNRPEP62304 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.13□□□□□ -0.31
SNRPEP62304 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNRPEP62304 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SNRPEP62304 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNRPEP62304 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SNRPEP62304 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
SNRPEP62304 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNRPEP62304 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SNRPEP62304 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.12□□□□□ -0.31
SNRPEP62304 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNRPEP62304 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNRPEP62304 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SNRPEP62304 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNRPEP62304 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.12□□□□□ -0.31
SNRPEP62304 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNRPEP62304 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNRPEP62304 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
SNRPEP62304 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SNRPEP62304 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SNRPEP62304 MFF-208ENST00000409616 1247 ntTSL 5 BASIC13.12□□□□□ -0.31
SNRPEP62304 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC13.12□□□□□ -0.31
SNRPEP62304 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC13.12□□□□□ -0.31
SNRPEP62304 AC010141.2-201ENST00000452426 721 ntBASIC13.12□□□□□ -0.31
SNRPEP62304 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC13.12□□□□□ -0.31
SNRPEP62304 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNRPEP62304 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC13.12□□□□□ -0.31
SNRPEP62304 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC13.12□□□□□ -0.31
SNRPEP62304 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SNRPEP62304 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNRPEP62304 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.12□□□□□ -0.31
SNRPEP62304 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.12□□□□□ -0.31
SNRPEP62304 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNRPEP62304 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNRPEP62304 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNRPEP62304 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNRPEP62304 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SNRPEP62304 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNRPEP62304 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNRPEP62304 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.12□□□□□ -0.31
SNRPEP62304 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
SNRPEP62304 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNRPEP62304 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNRPEP62304 AC027601.5-201ENST00000624065 2482 ntBASIC13.12□□□□□ -0.31
SNRPEP62304 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNRPEP62304 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNRPEP62304 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.12□□□□□ -0.31
SNRPEP62304 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNRPEP62304 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.11□□□□□ -0.31
SNRPEP62304 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNRPEP62304 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNRPEP62304 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNRPEP62304 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNRPEP62304 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SNRPEP62304 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.11□□□□□ -0.31
SNRPEP62304 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNRPEP62304 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SNRPEP62304 AL596087.1-201ENST00000400979 1969 ntBASIC13.11□□□□□ -0.31
SNRPEP62304 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNRPEP62304 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNRPEP62304 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNRPEP62304 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.11□□□□□ -0.31
SNRPEP62304 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNRPEP62304 SNX3-202ENST00000349379 890 ntTSL 2 BASIC13.11□□□□□ -0.31
SNRPEP62304 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNRPEP62304 SRD5A1P1-201ENST00000442297 786 ntBASIC13.11□□□□□ -0.31
SNRPEP62304 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNRPEP62304 MIR4449-201ENST00000578365 66 ntBASIC13.11□□□□□ -0.31
SNRPEP62304 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNRPEP62304 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
SNRPEP62304 AC011298.3-201ENST00000615796 283 ntBASIC13.11□□□□□ -0.31
SNRPEP62304 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNRPEP62304 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC13.11□□□□□ -0.31
SNRPEP62304 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNRPEP62304 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
SNRPEP62304 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNRPEP62304 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNRPEP62304 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNRPEP62304 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNRPEP62304 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.11□□□□□ -0.31
SNRPEP62304 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNRPEP62304 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.11□□□□□ -0.31
SNRPEP62304 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNRPEP62304 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNRPEP62304 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNRPEP62304 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNRPEP62304 HTR7P1-201ENST00000538670 1336 ntBASIC13.11□□□□□ -0.31
SNRPEP62304 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNRPEP62304 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms