Protein–RNA interactions for Protein: P60059

SEC61G, Protein transport protein Sec61 subunit gamma, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61GP60059 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SEC61GP60059 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC9.52□□□□□ -0.89
SEC61GP60059 AC026691.1-201ENST00000602502 2017 ntBASIC9.52□□□□□ -0.89
SEC61GP60059 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC9.52□□□□□ -0.89
SEC61GP60059 pRNA.6-201ENST00000610482 90 ntBASIC9.52□□□□□ -0.89
SEC61GP60059 pRNA.5-201ENST00000612139 90 ntBASIC9.52□□□□□ -0.89
SEC61GP60059 BHLHE23-202ENST00000612929 1109 ntBASIC9.52□□□□□ -0.89
SEC61GP60059 pRNA.11-201ENST00000618423 90 ntBASIC9.52□□□□□ -0.89
SEC61GP60059 pRNA.13-201ENST00000619112 90 ntBASIC9.52□□□□□ -0.89
SEC61GP60059 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SEC61GP60059 PTGR2-205ENST00000555661 3851 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SEC61GP60059 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SEC61GP60059 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC9.52□□□□□ -0.89
SEC61GP60059 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC9.52□□□□□ -0.89
SEC61GP60059 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SEC61GP60059 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.89
SEC61GP60059 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SEC61GP60059 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SEC61GP60059 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC9.52□□□□□ -0.89
SEC61GP60059 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
SEC61GP60059 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC9.52□□□□□ -0.89
SEC61GP60059 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
SEC61GP60059 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
SEC61GP60059 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
SEC61GP60059 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC9.52□□□□□ -0.89
SEC61GP60059 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SEC61GP60059 LRCH1-203ENST00000389798 4131 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
SEC61GP60059 LINC01583-202ENST00000558082 2568 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SEC61GP60059 AL031719.1-201ENST00000623365 2587 ntBASIC9.52□□□□□ -0.89
SEC61GP60059 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
SEC61GP60059 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SEC61GP60059 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
SEC61GP60059 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
SEC61GP60059 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC9.52□□□□□ -0.89
SEC61GP60059 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SEC61GP60059 AL118506.1-201ENST00000601296 3082 ntBASIC9.52□□□□□ -0.89
SEC61GP60059 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
SEC61GP60059 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SEC61GP60059 MADD-204ENST00000395336 5942 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
SEC61GP60059 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
SEC61GP60059 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
SEC61GP60059 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC9.52□□□□□ -0.89
SEC61GP60059 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC9.52□□□□□ -0.89
SEC61GP60059 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SEC61GP60059 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SEC61GP60059 AC111170.3-201ENST00000624282 2464 ntBASIC9.51□□□□□ -0.89
SEC61GP60059 BLZF1-201ENST00000329281 2300 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SEC61GP60059 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SEC61GP60059 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC9.51□□□□□ -0.89
SEC61GP60059 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SEC61GP60059 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SEC61GP60059 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
SEC61GP60059 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
SEC61GP60059 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC9.51□□□□□ -0.89
SEC61GP60059 TCF4-202ENST00000356073 8317 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
SEC61GP60059 PRKAB2-201ENST00000254101 5417 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SEC61GP60059 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SEC61GP60059 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SEC61GP60059 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
SEC61GP60059 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SEC61GP60059 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
SEC61GP60059 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
SEC61GP60059 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC9.51□□□□□ -0.89
SEC61GP60059 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SEC61GP60059 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SEC61GP60059 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC9.51□□□□□ -0.89
SEC61GP60059 AL022476.1-201ENST00000443063 2083 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SEC61GP60059 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SEC61GP60059 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SEC61GP60059 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SEC61GP60059 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
SEC61GP60059 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SEC61GP60059 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC9.51□□□□□ -0.89
SEC61GP60059 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC9.51□□□□□ -0.89
SEC61GP60059 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC9.51□□□□□ -0.89
SEC61GP60059 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
SEC61GP60059 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC9.51□□□□□ -0.89
SEC61GP60059 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SEC61GP60059 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
SEC61GP60059 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC9.51□□□□□ -0.89
SEC61GP60059 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SEC61GP60059 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC9.51□□□□□ -0.89
SEC61GP60059 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
SEC61GP60059 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
SEC61GP60059 SLC25A6P5-201ENST00000435663 894 ntBASIC9.51□□□□□ -0.89
SEC61GP60059 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
SEC61GP60059 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC9.51□□□□□ -0.89
SEC61GP60059 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC9.51□□□□□ -0.89
SEC61GP60059 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC9.51□□□□□ -0.89
SEC61GP60059 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC9.51□□□□□ -0.89
SEC61GP60059 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
SEC61GP60059 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
SEC61GP60059 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SEC61GP60059 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SEC61GP60059 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC9.51□□□□□ -0.89
SEC61GP60059 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
SEC61GP60059 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SEC61GP60059 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SEC61GP60059 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC9.51□□□□□ -0.89
SEC61GP60059 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms