Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15□□□□□ -0.01
FOXG1P55316 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15□□□□□ -0.01
FOXG1P55316 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
FOXG1P55316 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
FOXG1P55316 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15□□□□□ -0.01
FOXG1P55316 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15□□□□□ -0.01
FOXG1P55316 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
FOXG1P55316 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15□□□□□ -0.01
FOXG1P55316 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15□□□□□ -0.01
FOXG1P55316 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15□□□□□ -0.01
FOXG1P55316 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
FOXG1P55316 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
FOXG1P55316 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
FOXG1P55316 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15□□□□□ -0.01
FOXG1P55316 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
FOXG1P55316 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
FOXG1P55316 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
FOXG1P55316 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
FOXG1P55316 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
FOXG1P55316 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
FOXG1P55316 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
FOXG1P55316 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.99□□□□□ -0.01
FOXG1P55316 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
FOXG1P55316 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
FOXG1P55316 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
FOXG1P55316 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
FOXG1P55316 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
FOXG1P55316 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.99□□□□□ -0.01
FOXG1P55316 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
FOXG1P55316 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.99□□□□□ -0.01
FOXG1P55316 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.99□□□□□ -0.01
FOXG1P55316 PRSS29P-201ENST00000440800 595 ntBASIC14.99□□□□□ -0.01
FOXG1P55316 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.99□□□□□ -0.01
FOXG1P55316 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.99□□□□□ -0.01
FOXG1P55316 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.99□□□□□ -0.01
FOXG1P55316 DUX4L17-201ENST00000557360 1267 ntBASIC14.99□□□□□ -0.01
FOXG1P55316 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
FOXG1P55316 AC010654.1-201ENST00000615722 808 ntBASIC14.99□□□□□ -0.01
FOXG1P55316 FAM197Y3-203ENST00000618346 717 ntBASIC14.99□□□□□ -0.01
FOXG1P55316 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.99□□□□□ -0.01
FOXG1P55316 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
FOXG1P55316 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
FOXG1P55316 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
FOXG1P55316 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.99□□□□□ -0.01
FOXG1P55316 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
FOXG1P55316 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
FOXG1P55316 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.99□□□□□ -0.01
FOXG1P55316 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
FOXG1P55316 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
FOXG1P55316 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
FOXG1P55316 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
FOXG1P55316 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FOXG1P55316 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FOXG1P55316 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FOXG1P55316 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FOXG1P55316 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FOXG1P55316 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FOXG1P55316 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.98□□□□□ -0.01
FOXG1P55316 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
FOXG1P55316 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FOXG1P55316 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.98□□□□□ -0.01
FOXG1P55316 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
FOXG1P55316 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.98□□□□□ -0.01
FOXG1P55316 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
FOXG1P55316 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FOXG1P55316 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FOXG1P55316 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
FOXG1P55316 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
FOXG1P55316 AC023274.1-201ENST00000418278 595 ntBASIC14.98□□□□□ -0.01
FOXG1P55316 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.98□□□□□ -0.01
FOXG1P55316 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
FOXG1P55316 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.98□□□□□ -0.01
FOXG1P55316 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
FOXG1P55316 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
FOXG1P55316 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FOXG1P55316 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
FOXG1P55316 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
FOXG1P55316 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
FOXG1P55316 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
FOXG1P55316 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.98□□□□□ -0.01
FOXG1P55316 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
FOXG1P55316 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
FOXG1P55316 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.98□□□□□ -0.01
FOXG1P55316 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FOXG1P55316 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.97□□□□□ -0.01
FOXG1P55316 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FOXG1P55316 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FOXG1P55316 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FOXG1P55316 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FOXG1P55316 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FOXG1P55316 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FOXG1P55316 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
FOXG1P55316 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
FOXG1P55316 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
FOXG1P55316 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.97□□□□□ -0.01
FOXG1P55316 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.97□□□□□ -0.01
FOXG1P55316 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.97□□□□□ -0.01
FOXG1P55316 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
FOXG1P55316 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FOXG1P55316 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms