Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CLCN4P51793 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN4P51793 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN4P51793 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN4P51793 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN4P51793 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN4P51793 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CLCN4P51793 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.94■□□□□ 0.46
CLCN4P51793 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN4P51793 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.94■□□□□ 0.46
CLCN4P51793 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CLCN4P51793 PMS2P4-201ENST00000412466 1052 ntBASIC17.94■□□□□ 0.46
CLCN4P51793 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.94■□□□□ 0.46
CLCN4P51793 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CLCN4P51793 AC239800.4-201ENST00000603712 296 ntBASIC17.94■□□□□ 0.46
CLCN4P51793 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN4P51793 AC018470.1-201ENST00000624790 3129 ntBASIC17.94■□□□□ 0.46
CLCN4P51793 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.94■□□□□ 0.46
CLCN4P51793 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.94■□□□□ 0.46
CLCN4P51793 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN4P51793 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.94■□□□□ 0.46
CLCN4P51793 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.94■□□□□ 0.46
CLCN4P51793 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
CLCN4P51793 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CLCN4P51793 TUBB3P1-201ENST00000405796 1332 ntBASIC17.94■□□□□ 0.46
CLCN4P51793 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.94■□□□□ 0.46
CLCN4P51793 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN4P51793 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.94■□□□□ 0.46
CLCN4P51793 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN4P51793 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CLCN4P51793 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN4P51793 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CLCN4P51793 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CLCN4P51793 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CLCN4P51793 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN4P51793 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
CLCN4P51793 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN4P51793 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.93■□□□□ 0.46
CLCN4P51793 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN4P51793 AC055876.3-201ENST00000431496 288 ntBASIC17.93■□□□□ 0.46
CLCN4P51793 RBPMS2P1-201ENST00000437762 623 ntBASIC17.93■□□□□ 0.46
CLCN4P51793 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.93■□□□□ 0.46
CLCN4P51793 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN4P51793 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.93■□□□□ 0.46
CLCN4P51793 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.93■□□□□ 0.46
CLCN4P51793 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.93■□□□□ 0.46
CLCN4P51793 AL009183.1-201ENST00000603760 355 ntBASIC17.93■□□□□ 0.46
CLCN4P51793 AC138649.4-201ENST00000612222 287 ntBASIC17.93■□□□□ 0.46
CLCN4P51793 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN4P51793 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN4P51793 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.93■□□□□ 0.46
CLCN4P51793 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CLCN4P51793 AL133373.2-201ENST00000623187 2828 ntBASIC17.93■□□□□ 0.46
CLCN4P51793 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN4P51793 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN4P51793 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.92■□□□□ 0.46
CLCN4P51793 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN4P51793 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.92■□□□□ 0.46
CLCN4P51793 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
CLCN4P51793 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.92■□□□□ 0.46
CLCN4P51793 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.92■□□□□ 0.46
CLCN4P51793 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.92■□□□□ 0.46
CLCN4P51793 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN4P51793 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.92■□□□□ 0.46
CLCN4P51793 KLF2P3-201ENST00000451977 1087 ntBASIC17.92■□□□□ 0.46
CLCN4P51793 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.92■□□□□ 0.46
CLCN4P51793 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CLCN4P51793 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.92■□□□□ 0.46
CLCN4P51793 LINC01225-203ENST00000563550 1244 ntBASIC17.92■□□□□ 0.46
CLCN4P51793 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.92■□□□□ 0.46
CLCN4P51793 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN4P51793 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN4P51793 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.92■□□□□ 0.46
CLCN4P51793 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.92■□□□□ 0.46
CLCN4P51793 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.92■□□□□ 0.46
CLCN4P51793 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN4P51793 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.92■□□□□ 0.46
CLCN4P51793 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN4P51793 AC012569.1-201ENST00000591191 1524 ntBASIC17.92■□□□□ 0.46
CLCN4P51793 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.92■□□□□ 0.46
CLCN4P51793 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN4P51793 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.91■□□□□ 0.46
CLCN4P51793 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN4P51793 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN4P51793 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CLCN4P51793 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.91■□□□□ 0.46
CLCN4P51793 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN4P51793 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN4P51793 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN4P51793 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN4P51793 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN4P51793 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN4P51793 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN4P51793 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN4P51793 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.91■□□□□ 0.46
CLCN4P51793 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.91■□□□□ 0.46
CLCN4P51793 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CLCN4P51793 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN4P51793 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CLCN4P51793 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms