Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.93■□□□□ 0.62
BRCA2P51587 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
BRCA2P51587 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
BRCA2P51587 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
BRCA2P51587 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRCA2P51587 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRCA2P51587 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
BRCA2P51587 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.92■□□□□ 0.62
BRCA2P51587 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BRCA2P51587 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BRCA2P51587 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRCA2P51587 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRCA2P51587 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.92■□□□□ 0.62
BRCA2P51587 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
BRCA2P51587 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BRCA2P51587 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRCA2P51587 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
BRCA2P51587 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.92■□□□□ 0.62
BRCA2P51587 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRCA2P51587 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.92■□□□□ 0.62
BRCA2P51587 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.92■□□□□ 0.62
BRCA2P51587 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRCA2P51587 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
BRCA2P51587 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRCA2P51587 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRCA2P51587 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BRCA2P51587 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.92■□□□□ 0.62
BRCA2P51587 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.91■□□□□ 0.62
BRCA2P51587 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.91■□□□□ 0.62
BRCA2P51587 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BRCA2P51587 SLC22A20-204ENST00000530038 1673 ntBASIC18.91■□□□□ 0.62
BRCA2P51587 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.91■□□□□ 0.62
BRCA2P51587 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BRCA2P51587 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BRCA2P51587 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BRCA2P51587 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BRCA2P51587 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.91■□□□□ 0.62
BRCA2P51587 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
BRCA2P51587 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.91■□□□□ 0.62
BRCA2P51587 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.91■□□□□ 0.62
BRCA2P51587 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
BRCA2P51587 MIR1908-201ENST00000410394 80 ntBASIC18.91■□□□□ 0.62
BRCA2P51587 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.91■□□□□ 0.62
BRCA2P51587 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
BRCA2P51587 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC18.91■□□□□ 0.62
BRCA2P51587 AC073592.8-201ENST00000624126 511 ntBASIC18.91■□□□□ 0.62
BRCA2P51587 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.91■□□□□ 0.62
BRCA2P51587 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BRCA2P51587 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.91■□□□□ 0.62
BRCA2P51587 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
BRCA2P51587 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.91■□□□□ 0.62
BRCA2P51587 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BRCA2P51587 AL355994.2-201ENST00000447882 704 ntBASIC18.91■□□□□ 0.62
BRCA2P51587 HLA-V-204ENST00000476601 1289 ntBASIC18.91■□□□□ 0.62
BRCA2P51587 MIR4515-201ENST00000584082 81 ntBASIC18.91■□□□□ 0.62
BRCA2P51587 AC087499.5-201ENST00000452760 1342 ntBASIC18.91■□□□□ 0.62
BRCA2P51587 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
BRCA2P51587 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRCA2P51587 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
BRCA2P51587 ZNF890P-202ENST00000530367 1156 ntBASIC18.9■□□□□ 0.62
BRCA2P51587 AC135586.1-201ENST00000539323 574 ntBASIC18.9■□□□□ 0.62
BRCA2P51587 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
BRCA2P51587 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BRCA2P51587 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BRCA2P51587 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.9■□□□□ 0.62
BRCA2P51587 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
BRCA2P51587 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BRCA2P51587 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BRCA2P51587 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRCA2P51587 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRCA2P51587 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BRCA2P51587 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRCA2P51587 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.9■□□□□ 0.62
BRCA2P51587 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.9■□□□□ 0.62
BRCA2P51587 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.9■□□□□ 0.62
BRCA2P51587 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BRCA2P51587 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC18.9■□□□□ 0.62
BRCA2P51587 AC020907.1-201ENST00000616460 1350 ntBASIC18.9■□□□□ 0.62
BRCA2P51587 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BRCA2P51587 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRCA2P51587 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRCA2P51587 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRCA2P51587 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRCA2P51587 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BRCA2P51587 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.9■□□□□ 0.62
BRCA2P51587 AL512343.1-201ENST00000605837 169 ntBASIC18.9■□□□□ 0.62
BRCA2P51587 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
BRCA2P51587 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.62
BRCA2P51587 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
BRCA2P51587 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
BRCA2P51587 AL080243.2-201ENST00000418783 582 ntBASIC18.89■□□□□ 0.61
BRCA2P51587 ZNF767P-206ENST00000513792 565 ntBASIC18.89■□□□□ 0.61
BRCA2P51587 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.89■□□□□ 0.61
BRCA2P51587 AC244093.1-201ENST00000610837 814 ntBASIC18.89■□□□□ 0.61
BRCA2P51587 RETN-203ENST00000629642 400 ntTSL 5 BASIC18.89■□□□□ 0.61
BRCA2P51587 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
BRCA2P51587 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRCA2P51587 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.89■□□□□ 0.61
BRCA2P51587 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRCA2P51587 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms