Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPT1AP50416 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPT1AP50416 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPT1AP50416 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
CPT1AP50416 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.85■□□□□ 0.61
CPT1AP50416 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.85■□□□□ 0.61
CPT1AP50416 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CPT1AP50416 AC135050.7-201ENST00000624508 2218 ntBASIC18.85■□□□□ 0.61
CPT1AP50416 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CPT1AP50416 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPT1AP50416 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CPT1AP50416 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.85■□□□□ 0.61
CPT1AP50416 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPT1AP50416 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPT1AP50416 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPT1AP50416 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
CPT1AP50416 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPT1AP50416 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPT1AP50416 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.85■□□□□ 0.61
CPT1AP50416 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CPT1AP50416 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.85■□□□□ 0.61
CPT1AP50416 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.85■□□□□ 0.61
CPT1AP50416 SPDYE14P-201ENST00000442619 822 ntBASIC18.85■□□□□ 0.61
CPT1AP50416 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.85■□□□□ 0.61
CPT1AP50416 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPT1AP50416 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CPT1AP50416 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.85■□□□□ 0.61
CPT1AP50416 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CPT1AP50416 AC008267.7-201ENST00000624570 1194 ntBASIC18.85■□□□□ 0.61
CPT1AP50416 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.85■□□□□ 0.61
CPT1AP50416 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CPT1AP50416 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPT1AP50416 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.85■□□□□ 0.61
CPT1AP50416 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPT1AP50416 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPT1AP50416 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPT1AP50416 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CPT1AP50416 SLC22A20-204ENST00000530038 1673 ntBASIC18.85■□□□□ 0.61
CPT1AP50416 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CPT1AP50416 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CPT1AP50416 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPT1AP50416 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
CPT1AP50416 AC008677.1-201ENST00000519230 1561 ntBASIC18.85■□□□□ 0.61
CPT1AP50416 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPT1AP50416 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CPT1AP50416 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CPT1AP50416 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
CPT1AP50416 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.84■□□□□ 0.61
CPT1AP50416 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPT1AP50416 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.84■□□□□ 0.61
CPT1AP50416 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPT1AP50416 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CPT1AP50416 AC016396.2-201ENST00000562575 1417 ntBASIC18.84■□□□□ 0.61
CPT1AP50416 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPT1AP50416 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
CPT1AP50416 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CPT1AP50416 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPT1AP50416 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CPT1AP50416 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
CPT1AP50416 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.84■□□□□ 0.61
CPT1AP50416 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
CPT1AP50416 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CPT1AP50416 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.84■□□□□ 0.61
CPT1AP50416 AC190387.1-201ENST00000551683 408 ntBASIC18.84■□□□□ 0.61
CPT1AP50416 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.84■□□□□ 0.61
CPT1AP50416 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CPT1AP50416 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPT1AP50416 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.84■□□□□ 0.61
CPT1AP50416 AC239800.4-201ENST00000603712 296 ntBASIC18.84■□□□□ 0.61
CPT1AP50416 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CPT1AP50416 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CPT1AP50416 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPT1AP50416 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPT1AP50416 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.84■□□□□ 0.61
CPT1AP50416 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CPT1AP50416 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CPT1AP50416 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPT1AP50416 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.84■□□□□ 0.61
CPT1AP50416 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPT1AP50416 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.84■□□□□ 0.61
CPT1AP50416 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.83■□□□□ 0.61
CPT1AP50416 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CPT1AP50416 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.83■□□□□ 0.61
CPT1AP50416 HTR7P1-202ENST00000624664 4411 ntBASIC18.83■□□□□ 0.61
CPT1AP50416 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CPT1AP50416 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CPT1AP50416 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CPT1AP50416 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CPT1AP50416 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.83■□□□□ 0.61
CPT1AP50416 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.83■□□□□ 0.6
CPT1AP50416 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CPT1AP50416 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CPT1AP50416 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.83■□□□□ 0.6
CPT1AP50416 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CPT1AP50416 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.83■□□□□ 0.6
CPT1AP50416 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.83■□□□□ 0.6
CPT1AP50416 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.83■□□□□ 0.6
CPT1AP50416 SLC25A39P2-201ENST00000537614 270 ntBASIC18.83■□□□□ 0.6
CPT1AP50416 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.83■□□□□ 0.6
CPT1AP50416 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms