Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.68■□□□□ 0.58
CASP4P49662 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CASP4P49662 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CASP4P49662 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.68■□□□□ 0.58
CASP4P49662 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CASP4P49662 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.68■□□□□ 0.58
CASP4P49662 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
CASP4P49662 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CASP4P49662 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.68■□□□□ 0.58
CASP4P49662 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.68■□□□□ 0.58
CASP4P49662 AC243591.1-201ENST00000452967 1364 ntBASIC18.68■□□□□ 0.58
CASP4P49662 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CASP4P49662 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.67■□□□□ 0.58
CASP4P49662 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CASP4P49662 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CASP4P49662 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CASP4P49662 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CASP4P49662 AC084018.2-201ENST00000613093 2607 ntBASIC18.67■□□□□ 0.58
CASP4P49662 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CASP4P49662 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.67■□□□□ 0.58
CASP4P49662 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CASP4P49662 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.67■□□□□ 0.58
CASP4P49662 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.67■□□□□ 0.58
CASP4P49662 ELK2BP-201ENST00000415014 1224 ntBASIC18.67■□□□□ 0.58
CASP4P49662 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CASP4P49662 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CASP4P49662 AL160237.2-201ENST00000556165 472 ntBASIC18.67■□□□□ 0.58
CASP4P49662 AC012640.2-201ENST00000561606 901 ntBASIC18.67■□□□□ 0.58
CASP4P49662 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.67■□□□□ 0.58
CASP4P49662 AL049840.3-201ENST00000602669 611 ntBASIC18.67■□□□□ 0.58
CASP4P49662 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.67■□□□□ 0.58
CASP4P49662 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CASP4P49662 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CASP4P49662 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CASP4P49662 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CASP4P49662 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CASP4P49662 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
CASP4P49662 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.67■□□□□ 0.58
CASP4P49662 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CASP4P49662 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.67■□□□□ 0.58
CASP4P49662 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CASP4P49662 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CASP4P49662 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CASP4P49662 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CASP4P49662 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.66■□□□□ 0.58
CASP4P49662 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CASP4P49662 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.66■□□□□ 0.58
CASP4P49662 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CASP4P49662 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CASP4P49662 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.66■□□□□ 0.58
CASP4P49662 AC078925.2-201ENST00000624013 1973 ntBASIC18.66■□□□□ 0.58
CASP4P49662 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CASP4P49662 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CASP4P49662 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
CASP4P49662 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CASP4P49662 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
CASP4P49662 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CASP4P49662 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.66■□□□□ 0.58
CASP4P49662 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.66■□□□□ 0.58
CASP4P49662 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CASP4P49662 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.66■□□□□ 0.58
CASP4P49662 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.66■□□□□ 0.58
CASP4P49662 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.66■□□□□ 0.58
CASP4P49662 KRT18P67-201ENST00000432816 1264 ntBASIC18.66■□□□□ 0.58
CASP4P49662 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.66■□□□□ 0.58
CASP4P49662 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.66■□□□□ 0.58
CASP4P49662 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.66■□□□□ 0.58
CASP4P49662 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.66■□□□□ 0.58
CASP4P49662 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.66■□□□□ 0.58
CASP4P49662 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.66■□□□□ 0.58
CASP4P49662 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.66■□□□□ 0.58
CASP4P49662 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.66■□□□□ 0.58
CASP4P49662 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CASP4P49662 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CASP4P49662 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CASP4P49662 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CASP4P49662 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CASP4P49662 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CASP4P49662 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.66■□□□□ 0.58
CASP4P49662 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CASP4P49662 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.66■□□□□ 0.58
CASP4P49662 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.66■□□□□ 0.58
CASP4P49662 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CASP4P49662 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CASP4P49662 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASP4P49662 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASP4P49662 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.65■□□□□ 0.58
CASP4P49662 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASP4P49662 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASP4P49662 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASP4P49662 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CASP4P49662 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASP4P49662 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.65■□□□□ 0.58
CASP4P49662 PTCHD3P3-201ENST00000403073 906 ntBASIC18.65■□□□□ 0.58
CASP4P49662 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASP4P49662 LAGE3P1-201ENST00000425356 484 ntBASIC18.65■□□□□ 0.58
CASP4P49662 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.65■□□□□ 0.58
CASP4P49662 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.65■□□□□ 0.58
CASP4P49662 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.65■□□□□ 0.58
CASP4P49662 OR7E14P-202ENST00000530490 1290 ntBASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms