Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 AP002414.4-201ENST00000589764 1148 ntBASIC16.35■□□□□ 0.21
PRIM2P49643 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRIM2P49643 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PRIM2P49643 LINC02012-201ENST00000608206 1725 ntBASIC16.35■□□□□ 0.21
PRIM2P49643 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRIM2P49643 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRIM2P49643 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.35■□□□□ 0.21
PRIM2P49643 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRIM2P49643 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRIM2P49643 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRIM2P49643 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.35■□□□□ 0.21
PRIM2P49643 AC018695.7-201ENST00000624587 2492 ntBASIC16.35■□□□□ 0.21
PRIM2P49643 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRIM2P49643 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRIM2P49643 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRIM2P49643 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRIM2P49643 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRIM2P49643 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
PRIM2P49643 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRIM2P49643 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
PRIM2P49643 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRIM2P49643 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRIM2P49643 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRIM2P49643 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.34■□□□□ 0.21
PRIM2P49643 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
PRIM2P49643 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRIM2P49643 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PRIM2P49643 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.34■□□□□ 0.21
PRIM2P49643 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRIM2P49643 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PRIM2P49643 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRIM2P49643 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRIM2P49643 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
PRIM2P49643 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.34■□□□□ 0.21
PRIM2P49643 AC046185.3-201ENST00000623228 1824 ntBASIC16.34■□□□□ 0.21
PRIM2P49643 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRIM2P49643 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRIM2P49643 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRIM2P49643 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRIM2P49643 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRIM2P49643 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.34■□□□□ 0.21
PRIM2P49643 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.34■□□□□ 0.21
PRIM2P49643 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.34■□□□□ 0.21
PRIM2P49643 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRIM2P49643 MINOS1P3-201ENST00000457048 203 ntBASIC16.34■□□□□ 0.21
PRIM2P49643 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.34■□□□□ 0.21
PRIM2P49643 AC069148.1-201ENST00000608741 768 ntBASIC16.34■□□□□ 0.21
PRIM2P49643 AC091076.1-201ENST00000610741 619 ntBASIC16.34■□□□□ 0.21
PRIM2P49643 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRIM2P49643 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.34■□□□□ 0.21
PRIM2P49643 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRIM2P49643 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRIM2P49643 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRIM2P49643 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRIM2P49643 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.34■□□□□ 0.21
PRIM2P49643 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.34■□□□□ 0.21
PRIM2P49643 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PRIM2P49643 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.34■□□□□ 0.21
PRIM2P49643 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PRIM2P49643 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRIM2P49643 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRIM2P49643 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.34■□□□□ 0.21
PRIM2P49643 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PRIM2P49643 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRIM2P49643 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRIM2P49643 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PRIM2P49643 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRIM2P49643 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRIM2P49643 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRIM2P49643 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRIM2P49643 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.33■□□□□ 0.21
PRIM2P49643 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.21
PRIM2P49643 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PRIM2P49643 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PRIM2P49643 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
PRIM2P49643 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.33■□□□□ 0.21
PRIM2P49643 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.33■□□□□ 0.21
PRIM2P49643 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
PRIM2P49643 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
PRIM2P49643 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRIM2P49643 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRIM2P49643 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.33■□□□□ 0.2
PRIM2P49643 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRIM2P49643 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PRIM2P49643 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRIM2P49643 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PRIM2P49643 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.33■□□□□ 0.2
PRIM2P49643 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRIM2P49643 AP002383.4-201ENST00000442518 975 ntBASIC16.33■□□□□ 0.2
PRIM2P49643 LINC00265-3P-201ENST00000447588 903 ntBASIC16.33■□□□□ 0.2
PRIM2P49643 KRT17P6-201ENST00000453795 1220 ntBASIC16.33■□□□□ 0.2
PRIM2P49643 TOB2P1-201ENST00000469761 992 ntBASIC16.33■□□□□ 0.2
PRIM2P49643 AC091607.1-201ENST00000490318 1060 ntBASIC16.33■□□□□ 0.2
PRIM2P49643 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.33■□□□□ 0.2
PRIM2P49643 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.33■□□□□ 0.2
PRIM2P49643 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.33■□□□□ 0.2
PRIM2P49643 AC011467.2-201ENST00000598425 242 ntBASIC16.33■□□□□ 0.2
PRIM2P49643 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.33■□□□□ 0.2
PRIM2P49643 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.33■□□□□ 0.2
PRIM2P49643 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms