Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM4SF4P48230 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM4SF4P48230 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TM4SF4P48230 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TM4SF4P48230 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.27■□□□□ 0.68
TM4SF4P48230 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TM4SF4P48230 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TM4SF4P48230 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
TM4SF4P48230 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TM4SF4P48230 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.27■□□□□ 0.68
TM4SF4P48230 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TM4SF4P48230 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC19.27■□□□□ 0.68
TM4SF4P48230 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TM4SF4P48230 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TM4SF4P48230 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
TM4SF4P48230 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.68
TM4SF4P48230 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TM4SF4P48230 AC114501.2-201ENST00000439631 535 ntBASIC19.27■□□□□ 0.68
TM4SF4P48230 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TM4SF4P48230 GALT-202ENST00000450095 1280 ntTSL 2 BASIC19.27■□□□□ 0.68
TM4SF4P48230 NEU3-203ENST00000529024 581 ntTSL 3 BASIC19.27■□□□□ 0.68
TM4SF4P48230 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
TM4SF4P48230 AC055876.2-201ENST00000531834 546 ntBASIC19.27■□□□□ 0.68
TM4SF4P48230 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
TM4SF4P48230 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.27■□□□□ 0.68
TM4SF4P48230 MIR4538-201ENST00000581377 78 ntBASIC19.27■□□□□ 0.68
TM4SF4P48230 TEX48-202ENST00000612244 662 ntTSL 3 BASIC19.27■□□□□ 0.68
TM4SF4P48230 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.27■□□□□ 0.68
TM4SF4P48230 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TM4SF4P48230 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TM4SF4P48230 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.27■□□□□ 0.67
TM4SF4P48230 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
TM4SF4P48230 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TM4SF4P48230 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TM4SF4P48230 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
TM4SF4P48230 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC19.26■□□□□ 0.67
TM4SF4P48230 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TM4SF4P48230 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TM4SF4P48230 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
TM4SF4P48230 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TM4SF4P48230 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TM4SF4P48230 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TM4SF4P48230 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
TM4SF4P48230 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.26■□□□□ 0.67
TM4SF4P48230 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC19.26■□□□□ 0.67
TM4SF4P48230 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
TM4SF4P48230 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC19.26■□□□□ 0.67
TM4SF4P48230 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC19.26■□□□□ 0.67
TM4SF4P48230 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TM4SF4P48230 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TM4SF4P48230 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC19.26■□□□□ 0.67
TM4SF4P48230 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TM4SF4P48230 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC19.26■□□□□ 0.67
TM4SF4P48230 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TM4SF4P48230 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC19.26■□□□□ 0.67
TM4SF4P48230 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TM4SF4P48230 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TM4SF4P48230 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TM4SF4P48230 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TM4SF4P48230 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC19.25■□□□□ 0.67
TM4SF4P48230 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC19.25■□□□□ 0.67
TM4SF4P48230 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TM4SF4P48230 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TM4SF4P48230 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
TM4SF4P48230 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TM4SF4P48230 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TM4SF4P48230 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TM4SF4P48230 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC19.25■□□□□ 0.67
TM4SF4P48230 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TM4SF4P48230 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC19.25■□□□□ 0.67
TM4SF4P48230 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TM4SF4P48230 NME6-203ENST00000415644 849 ntTSL 2 BASIC19.25■□□□□ 0.67
TM4SF4P48230 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.25■□□□□ 0.67
TM4SF4P48230 AC234783.1-201ENST00000441761 496 ntBASIC19.25■□□□□ 0.67
TM4SF4P48230 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC19.25■□□□□ 0.67
TM4SF4P48230 RN7SL618P-201ENST00000477850 296 ntBASIC19.25■□□□□ 0.67
TM4SF4P48230 SPDYE18-201ENST00000510091 1050 ntBASIC19.25■□□□□ 0.67
TM4SF4P48230 SNX29P1-201ENST00000548357 1007 ntBASIC19.25■□□□□ 0.67
TM4SF4P48230 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TM4SF4P48230 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TM4SF4P48230 AC044860.1-202ENST00000559481 777 ntBASIC19.25■□□□□ 0.67
TM4SF4P48230 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TM4SF4P48230 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.25■□□□□ 0.67
TM4SF4P48230 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC19.25■□□□□ 0.67
TM4SF4P48230 CTBP2P3-201ENST00000585629 1255 ntBASIC19.25■□□□□ 0.67
TM4SF4P48230 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TM4SF4P48230 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC19.25■□□□□ 0.67
TM4SF4P48230 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.25■□□□□ 0.67
TM4SF4P48230 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
TM4SF4P48230 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TM4SF4P48230 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TM4SF4P48230 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM4SF4P48230 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.24■□□□□ 0.67
TM4SF4P48230 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TM4SF4P48230 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.24■□□□□ 0.67
TM4SF4P48230 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM4SF4P48230 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TM4SF4P48230 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM4SF4P48230 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.24■□□□□ 0.67
TM4SF4P48230 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms