Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A1P43005 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A1P43005 AC097637.2-201ENST00000624096 1997 ntBASIC17.95■□□□□ 0.46
SLC1A1P43005 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A1P43005 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SLC1A1P43005 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A1P43005 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC1A1P43005 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A1P43005 AC079776.2-201ENST00000641154 1609 ntBASIC17.94■□□□□ 0.46
SLC1A1P43005 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC1A1P43005 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
SLC1A1P43005 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC1A1P43005 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC1A1P43005 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A1P43005 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A1P43005 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
SLC1A1P43005 PCDHB19P-201ENST00000570871 2371 ntBASIC17.94■□□□□ 0.46
SLC1A1P43005 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A1P43005 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A1P43005 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A1P43005 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A1P43005 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SLC1A1P43005 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.94■□□□□ 0.46
SLC1A1P43005 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC1A1P43005 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC1A1P43005 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SLC1A1P43005 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SLC1A1P43005 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A1P43005 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC1A1P43005 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A1P43005 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
SLC1A1P43005 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A1P43005 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A1P43005 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A1P43005 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A1P43005 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SLC1A1P43005 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A1P43005 AC004817.3-201ENST00000602957 2129 ntBASIC17.93■□□□□ 0.46
SLC1A1P43005 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SLC1A1P43005 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC1A1P43005 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A1P43005 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.93■□□□□ 0.46
SLC1A1P43005 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A1P43005 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A1P43005 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC1A1P43005 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A1P43005 LINC00982-205ENST00000420957 435 ntBASIC17.93■□□□□ 0.46
SLC1A1P43005 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SLC1A1P43005 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC1A1P43005 AC099336.1-202ENST00000602961 463 ntBASIC17.93■□□□□ 0.46
SLC1A1P43005 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.93■□□□□ 0.46
SLC1A1P43005 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC1A1P43005 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A1P43005 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A1P43005 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A1P43005 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A1P43005 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC1A1P43005 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A1P43005 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC1A1P43005 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SLC1A1P43005 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.92■□□□□ 0.46
SLC1A1P43005 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
SLC1A1P43005 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A1P43005 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC1A1P43005 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC1A1P43005 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A1P43005 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A1P43005 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.92■□□□□ 0.46
SLC1A1P43005 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.92■□□□□ 0.46
SLC1A1P43005 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A1P43005 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.92■□□□□ 0.46
SLC1A1P43005 AP002414.1-201ENST00000391405 1147 ntBASIC17.92■□□□□ 0.46
SLC1A1P43005 DUX4L17-201ENST00000557360 1267 ntBASIC17.92■□□□□ 0.46
SLC1A1P43005 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.92■□□□□ 0.46
SLC1A1P43005 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.92■□□□□ 0.46
SLC1A1P43005 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC1A1P43005 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.92■□□□□ 0.46
SLC1A1P43005 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.92■□□□□ 0.46
SLC1A1P43005 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SLC1A1P43005 AC091076.1-201ENST00000610741 619 ntBASIC17.92■□□□□ 0.46
SLC1A1P43005 AC010331.1-201ENST00000611423 582 ntBASIC17.92■□□□□ 0.46
SLC1A1P43005 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A1P43005 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SLC1A1P43005 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A1P43005 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A1P43005 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A1P43005 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A1P43005 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A1P43005 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A1P43005 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A1P43005 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A1P43005 AL021920.2-201ENST00000624828 1351 ntBASIC17.91■□□□□ 0.46
SLC1A1P43005 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SLC1A1P43005 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.91■□□□□ 0.46
SLC1A1P43005 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A1P43005 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A1P43005 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A1P43005 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A1P43005 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A1P43005 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms