Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
GRIA1P42261 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GRIA1P42261 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
GRIA1P42261 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GRIA1P42261 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
GRIA1P42261 LINC00982-205ENST00000420957 435 ntBASIC17.37■□□□□ 0.37
GRIA1P42261 ACTG1P4-201ENST00000425123 1122 ntBASIC17.37■□□□□ 0.37
GRIA1P42261 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
GRIA1P42261 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
GRIA1P42261 KRT16P4-201ENST00000453883 522 ntBASIC17.37■□□□□ 0.37
GRIA1P42261 BX005266.1-201ENST00000473402 457 ntBASIC17.37■□□□□ 0.37
GRIA1P42261 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.37■□□□□ 0.37
GRIA1P42261 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GRIA1P42261 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.37■□□□□ 0.37
GRIA1P42261 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.37■□□□□ 0.37
GRIA1P42261 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GRIA1P42261 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
GRIA1P42261 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GRIA1P42261 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GRIA1P42261 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
GRIA1P42261 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
GRIA1P42261 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GRIA1P42261 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GRIA1P42261 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.36■□□□□ 0.37
GRIA1P42261 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
GRIA1P42261 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GRIA1P42261 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GRIA1P42261 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
GRIA1P42261 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GRIA1P42261 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GRIA1P42261 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GRIA1P42261 AC018695.7-201ENST00000624587 2492 ntBASIC17.36■□□□□ 0.37
GRIA1P42261 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GRIA1P42261 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GRIA1P42261 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GRIA1P42261 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.36■□□□□ 0.37
GRIA1P42261 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GRIA1P42261 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.36■□□□□ 0.37
GRIA1P42261 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.36■□□□□ 0.37
GRIA1P42261 DUX4L17-201ENST00000557360 1267 ntBASIC17.36■□□□□ 0.37
GRIA1P42261 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.36■□□□□ 0.37
GRIA1P42261 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GRIA1P42261 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GRIA1P42261 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GRIA1P42261 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GRIA1P42261 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GRIA1P42261 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GRIA1P42261 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GRIA1P42261 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GRIA1P42261 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GRIA1P42261 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
GRIA1P42261 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GRIA1P42261 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.36■□□□□ 0.37
GRIA1P42261 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
GRIA1P42261 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.36■□□□□ 0.37
GRIA1P42261 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.36■□□□□ 0.37
GRIA1P42261 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GRIA1P42261 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.36■□□□□ 0.37
GRIA1P42261 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GRIA1P42261 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GRIA1P42261 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.35■□□□□ 0.37
GRIA1P42261 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
GRIA1P42261 PCDH8P1-201ENST00000428983 2773 ntBASIC17.35■□□□□ 0.37
GRIA1P42261 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.35■□□□□ 0.37
GRIA1P42261 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GRIA1P42261 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.35■□□□□ 0.37
GRIA1P42261 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GRIA1P42261 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GRIA1P42261 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GRIA1P42261 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GRIA1P42261 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.35■□□□□ 0.37
GRIA1P42261 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
GRIA1P42261 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.35■□□□□ 0.37
GRIA1P42261 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
GRIA1P42261 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.35■□□□□ 0.37
GRIA1P42261 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GRIA1P42261 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.35■□□□□ 0.37
GRIA1P42261 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GRIA1P42261 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.35■□□□□ 0.37
GRIA1P42261 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
GRIA1P42261 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GRIA1P42261 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GRIA1P42261 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
GRIA1P42261 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GRIA1P42261 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.35■□□□□ 0.37
GRIA1P42261 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.35■□□□□ 0.37
GRIA1P42261 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
GRIA1P42261 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.35■□□□□ 0.37
GRIA1P42261 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GRIA1P42261 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GRIA1P42261 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GRIA1P42261 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
GRIA1P42261 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
GRIA1P42261 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GRIA1P42261 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GRIA1P42261 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
GRIA1P42261 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.34■□□□□ 0.37
GRIA1P42261 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GRIA1P42261 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GRIA1P42261 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms