Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CEACAM3P40198 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CEACAM3P40198 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CEACAM3P40198 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CEACAM3P40198 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.01□□□□□ -0.17
CEACAM3P40198 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CEACAM3P40198 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CEACAM3P40198 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.01□□□□□ -0.17
CEACAM3P40198 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.01□□□□□ -0.17
CEACAM3P40198 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CEACAM3P40198 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CEACAM3P40198 LINC00982-205ENST00000420957 435 ntBASIC14.01□□□□□ -0.17
CEACAM3P40198 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.01□□□□□ -0.17
CEACAM3P40198 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CEACAM3P40198 RNPS1P1-201ENST00000507437 918 ntBASIC14.01□□□□□ -0.17
CEACAM3P40198 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CEACAM3P40198 AL160237.2-201ENST00000556165 472 ntBASIC14.01□□□□□ -0.17
CEACAM3P40198 AC021087.4-201ENST00000563761 564 ntBASIC14.01□□□□□ -0.17
CEACAM3P40198 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.01□□□□□ -0.17
CEACAM3P40198 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.01□□□□□ -0.17
CEACAM3P40198 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.01□□□□□ -0.17
CEACAM3P40198 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.01□□□□□ -0.17
CEACAM3P40198 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.01□□□□□ -0.17
CEACAM3P40198 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.01□□□□□ -0.17
CEACAM3P40198 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.01□□□□□ -0.17
CEACAM3P40198 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.01□□□□□ -0.17
CEACAM3P40198 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CEACAM3P40198 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.01□□□□□ -0.17
CEACAM3P40198 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CEACAM3P40198 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CEACAM3P40198 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.01□□□□□ -0.17
CEACAM3P40198 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CEACAM3P40198 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CEACAM3P40198 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CEACAM3P40198 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CEACAM3P40198 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CEACAM3P40198 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.01□□□□□ -0.17
CEACAM3P40198 AC093525.9-201ENST00000624961 1746 ntBASIC14.01□□□□□ -0.17
CEACAM3P40198 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CEACAM3P40198 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CEACAM3P40198 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.01□□□□□ -0.17
CEACAM3P40198 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CEACAM3P40198 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CEACAM3P40198 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CEACAM3P40198 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CEACAM3P40198 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14□□□□□ -0.17
CEACAM3P40198 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
CEACAM3P40198 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CEACAM3P40198 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CEACAM3P40198 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CEACAM3P40198 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14□□□□□ -0.17
CEACAM3P40198 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14□□□□□ -0.17
CEACAM3P40198 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14□□□□□ -0.17
CEACAM3P40198 AL773604.1-201ENST00000617417 272 ntBASIC14□□□□□ -0.17
CEACAM3P40198 AL031008.1-201ENST00000619963 541 ntBASIC14□□□□□ -0.17
CEACAM3P40198 MIR1199-201ENST00000621445 119 ntBASIC14□□□□□ -0.17
CEACAM3P40198 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14□□□□□ -0.17
CEACAM3P40198 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CEACAM3P40198 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14□□□□□ -0.17
CEACAM3P40198 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CEACAM3P40198 AC116353.5-201ENST00000638148 1699 ntBASIC14□□□□□ -0.17
CEACAM3P40198 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14□□□□□ -0.17
CEACAM3P40198 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CEACAM3P40198 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CEACAM3P40198 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CEACAM3P40198 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC13.99□□□□□ -0.17
CEACAM3P40198 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CEACAM3P40198 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CEACAM3P40198 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CEACAM3P40198 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CEACAM3P40198 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
CEACAM3P40198 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CEACAM3P40198 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC13.99□□□□□ -0.17
CEACAM3P40198 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CEACAM3P40198 AC004817.3-201ENST00000602957 2129 ntBASIC13.99□□□□□ -0.17
CEACAM3P40198 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CEACAM3P40198 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CEACAM3P40198 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
CEACAM3P40198 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
CEACAM3P40198 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CEACAM3P40198 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CEACAM3P40198 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
CEACAM3P40198 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.99□□□□□ -0.17
CEACAM3P40198 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CEACAM3P40198 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.99□□□□□ -0.17
CEACAM3P40198 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CEACAM3P40198 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CEACAM3P40198 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.99□□□□□ -0.17
CEACAM3P40198 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CEACAM3P40198 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.99□□□□□ -0.17
CEACAM3P40198 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC13.99□□□□□ -0.17
CEACAM3P40198 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.99□□□□□ -0.17
CEACAM3P40198 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC13.99□□□□□ -0.17
CEACAM3P40198 AL139424.1-201ENST00000607572 797 ntBASIC13.99□□□□□ -0.17
CEACAM3P40198 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.99□□□□□ -0.17
CEACAM3P40198 AC107918.4-202ENST00000641623 219 ntBASIC13.99□□□□□ -0.17
CEACAM3P40198 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CEACAM3P40198 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CEACAM3P40198 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CEACAM3P40198 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms