Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHKAP35790 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CHKAP35790 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CHKAP35790 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CHKAP35790 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHKAP35790 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHKAP35790 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHKAP35790 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHKAP35790 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHKAP35790 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHKAP35790 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHKAP35790 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHKAP35790 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.1■□□□□ 0.49
CHKAP35790 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.1■□□□□ 0.49
CHKAP35790 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.1■□□□□ 0.49
CHKAP35790 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHKAP35790 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.1■□□□□ 0.49
CHKAP35790 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CHKAP35790 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.1■□□□□ 0.49
CHKAP35790 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.1■□□□□ 0.49
CHKAP35790 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CHKAP35790 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.1■□□□□ 0.49
CHKAP35790 SIGLEC30P-201ENST00000455569 941 ntBASIC18.1■□□□□ 0.49
CHKAP35790 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.1■□□□□ 0.49
CHKAP35790 AC105339.3-201ENST00000560043 636 ntBASIC18.1■□□□□ 0.49
CHKAP35790 AF228730.7-201ENST00000641842 219 ntBASIC18.1■□□□□ 0.49
CHKAP35790 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHKAP35790 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHKAP35790 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHKAP35790 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHKAP35790 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.1■□□□□ 0.49
CHKAP35790 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHKAP35790 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
CHKAP35790 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHKAP35790 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CHKAP35790 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CHKAP35790 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHKAP35790 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHKAP35790 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CHKAP35790 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHKAP35790 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHKAP35790 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHKAP35790 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHKAP35790 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHKAP35790 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CHKAP35790 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHKAP35790 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHKAP35790 AC105020.1-201ENST00000435356 2205 ntBASIC18.09■□□□□ 0.49
CHKAP35790 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHKAP35790 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHKAP35790 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.09■□□□□ 0.49
CHKAP35790 RPL13AP23-201ENST00000480739 586 ntBASIC18.09■□□□□ 0.49
CHKAP35790 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CHKAP35790 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.09■□□□□ 0.49
CHKAP35790 STK19B-204ENST00000512515 211 ntBASIC18.09■□□□□ 0.49
CHKAP35790 AC006557.2-201ENST00000592985 1240 ntBASIC18.09■□□□□ 0.49
CHKAP35790 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.09■□□□□ 0.49
CHKAP35790 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.09■□□□□ 0.49
CHKAP35790 AC004817.3-201ENST00000602957 2129 ntBASIC18.09■□□□□ 0.49
CHKAP35790 AL589182.2-201ENST00000619332 1049 ntBASIC18.09■□□□□ 0.49
CHKAP35790 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.09■□□□□ 0.49
CHKAP35790 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.09■□□□□ 0.49
CHKAP35790 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHKAP35790 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.09■□□□□ 0.49
CHKAP35790 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.09■□□□□ 0.49
CHKAP35790 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHKAP35790 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHKAP35790 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHKAP35790 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHKAP35790 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
CHKAP35790 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHKAP35790 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.09■□□□□ 0.49
CHKAP35790 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHKAP35790 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CHKAP35790 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHKAP35790 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.09■□□□□ 0.49
CHKAP35790 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CHKAP35790 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHKAP35790 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHKAP35790 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CHKAP35790 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHKAP35790 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHKAP35790 ZNF259P1-201ENST00000407656 1365 ntBASIC18.08■□□□□ 0.49
CHKAP35790 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHKAP35790 PCDHB19P-201ENST00000570871 2371 ntBASIC18.08■□□□□ 0.48
CHKAP35790 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHKAP35790 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHKAP35790 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.08■□□□□ 0.48
CHKAP35790 PMS2P1-201ENST00000431037 1228 ntBASIC18.08■□□□□ 0.48
CHKAP35790 AC092910.1-201ENST00000482027 1129 ntBASIC18.08■□□□□ 0.48
CHKAP35790 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.08■□□□□ 0.48
CHKAP35790 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.08■□□□□ 0.48
CHKAP35790 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.08■□□□□ 0.48
CHKAP35790 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.08■□□□□ 0.48
CHKAP35790 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.08■□□□□ 0.48
CHKAP35790 AC106730.1-201ENST00000566722 1090 ntBASIC18.08■□□□□ 0.48
CHKAP35790 STK25P1-201ENST00000585406 838 ntBASIC18.08■□□□□ 0.48
CHKAP35790 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHKAP35790 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.08■□□□□ 0.48
CHKAP35790 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms