Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.45■□□□□ 0.7
HOXA13P31271 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.45■□□□□ 0.7
HOXA13P31271 C20orf181-201ENST00000623918 480 ntBASIC19.45■□□□□ 0.7
HOXA13P31271 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA13P31271 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA13P31271 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA13P31271 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA13P31271 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA13P31271 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA13P31271 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.45■□□□□ 0.7
HOXA13P31271 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA13P31271 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA13P31271 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
HOXA13P31271 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA13P31271 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA13P31271 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA13P31271 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA13P31271 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.44■□□□□ 0.7
HOXA13P31271 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA13P31271 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA13P31271 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HOXA13P31271 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
HOXA13P31271 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA13P31271 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXA13P31271 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
HOXA13P31271 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXA13P31271 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.44■□□□□ 0.7
HOXA13P31271 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
HOXA13P31271 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA13P31271 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA13P31271 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.44■□□□□ 0.7
HOXA13P31271 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.44■□□□□ 0.7
HOXA13P31271 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA13P31271 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA13P31271 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.44■□□□□ 0.7
HOXA13P31271 HTR5BP-201ENST00000430851 1154 ntBASIC19.44■□□□□ 0.7
HOXA13P31271 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HOXA13P31271 AC004967.1-201ENST00000453589 447 ntBASIC19.44■□□□□ 0.7
HOXA13P31271 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXA13P31271 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.44■□□□□ 0.7
HOXA13P31271 MIR4469-201ENST00000583919 79 ntBASIC19.44■□□□□ 0.7
HOXA13P31271 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.44■□□□□ 0.7
HOXA13P31271 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXA13P31271 AC092053.1-201ENST00000605787 1936 ntBASIC19.44■□□□□ 0.7
HOXA13P31271 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.44■□□□□ 0.7
HOXA13P31271 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
HOXA13P31271 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA13P31271 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA13P31271 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA13P31271 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.44■□□□□ 0.7
HOXA13P31271 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA13P31271 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXA13P31271 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA13P31271 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
HOXA13P31271 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA13P31271 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXA13P31271 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.43■□□□□ 0.7
HOXA13P31271 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA13P31271 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA13P31271 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA13P31271 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXA13P31271 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.43■□□□□ 0.7
HOXA13P31271 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA13P31271 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
HOXA13P31271 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.43■□□□□ 0.7
HOXA13P31271 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXA13P31271 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
HOXA13P31271 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA13P31271 FRMD8P1-201ENST00000440433 1524 ntBASIC19.43■□□□□ 0.7
HOXA13P31271 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.43■□□□□ 0.7
HOXA13P31271 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA13P31271 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.43■□□□□ 0.7
HOXA13P31271 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXA13P31271 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA13P31271 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.43■□□□□ 0.7
HOXA13P31271 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.43■□□□□ 0.7
HOXA13P31271 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA13P31271 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA13P31271 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA13P31271 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA13P31271 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA13P31271 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA13P31271 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA13P31271 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA13P31271 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA13P31271 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA13P31271 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA13P31271 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXA13P31271 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA13P31271 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA13P31271 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA13P31271 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXA13P31271 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HOXA13P31271 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXA13P31271 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.42■□□□□ 0.7
HOXA13P31271 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXA13P31271 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXA13P31271 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HOXA13P31271 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXA13P31271 AC211486.1-202ENST00000416371 468 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms