Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
MMP8P22894 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18■□□□□ 0.47
MMP8P22894 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MMP8P22894 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
MMP8P22894 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MMP8P22894 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18■□□□□ 0.47
MMP8P22894 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18■□□□□ 0.47
MMP8P22894 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
MMP8P22894 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MMP8P22894 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
MMP8P22894 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
MMP8P22894 AC006504.4-201ENST00000592118 1568 ntBASIC18■□□□□ 0.47
MMP8P22894 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MMP8P22894 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.99■□□□□ 0.47
MMP8P22894 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.99■□□□□ 0.47
MMP8P22894 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
MMP8P22894 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
MMP8P22894 AL645728.1-201ENST00000366221 2101 ntBASIC17.99■□□□□ 0.47
MMP8P22894 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.99■□□□□ 0.47
MMP8P22894 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.99■□□□□ 0.47
MMP8P22894 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
MMP8P22894 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
MMP8P22894 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MMP8P22894 OR6D1P-202ENST00000641007 5290 ntBASIC17.99■□□□□ 0.47
MMP8P22894 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
MMP8P22894 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MMP8P22894 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
MMP8P22894 PTCHD3P3-201ENST00000403073 906 ntBASIC17.99■□□□□ 0.47
MMP8P22894 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.99■□□□□ 0.47
MMP8P22894 ELK2BP-201ENST00000415014 1224 ntBASIC17.99■□□□□ 0.47
MMP8P22894 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.99■□□□□ 0.47
MMP8P22894 RNPS1P1-201ENST00000507437 918 ntBASIC17.99■□□□□ 0.47
MMP8P22894 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.99■□□□□ 0.47
MMP8P22894 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
MMP8P22894 AC006557.2-201ENST00000592985 1240 ntBASIC17.99■□□□□ 0.47
MMP8P22894 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.99■□□□□ 0.47
MMP8P22894 AL691432.3-201ENST00000621860 400 ntBASIC17.99■□□□□ 0.47
MMP8P22894 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MMP8P22894 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
MMP8P22894 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
MMP8P22894 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MMP8P22894 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
MMP8P22894 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MMP8P22894 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
MMP8P22894 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.99■□□□□ 0.47
MMP8P22894 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.99■□□□□ 0.47
MMP8P22894 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.98■□□□□ 0.47
MMP8P22894 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.98■□□□□ 0.47
MMP8P22894 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MMP8P22894 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.98■□□□□ 0.47
MMP8P22894 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
MMP8P22894 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.98■□□□□ 0.47
MMP8P22894 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.98■□□□□ 0.47
MMP8P22894 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MMP8P22894 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MMP8P22894 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.98■□□□□ 0.47
MMP8P22894 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.98■□□□□ 0.47
MMP8P22894 KRT18P27-201ENST00000427733 1299 ntBASIC17.98■□□□□ 0.47
MMP8P22894 RPS2P1-201ENST00000434010 821 ntBASIC17.98■□□□□ 0.47
MMP8P22894 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.98■□□□□ 0.47
MMP8P22894 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.98■□□□□ 0.47
MMP8P22894 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.98■□□□□ 0.47
MMP8P22894 AL021920.2-201ENST00000624828 1351 ntBASIC17.98■□□□□ 0.47
MMP8P22894 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.98■□□□□ 0.47
MMP8P22894 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MMP8P22894 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
MMP8P22894 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
MMP8P22894 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
MMP8P22894 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
MMP8P22894 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.98■□□□□ 0.47
MMP8P22894 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
MMP8P22894 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
MMP8P22894 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MMP8P22894 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
MMP8P22894 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MMP8P22894 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
MMP8P22894 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.97■□□□□ 0.47
MMP8P22894 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
MMP8P22894 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
MMP8P22894 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
MMP8P22894 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
MMP8P22894 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MMP8P22894 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.97■□□□□ 0.47
MMP8P22894 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MMP8P22894 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MMP8P22894 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MMP8P22894 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
MMP8P22894 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MMP8P22894 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.97■□□□□ 0.47
MMP8P22894 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.97■□□□□ 0.47
MMP8P22894 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
MMP8P22894 AC018712.1-201ENST00000455767 687 ntBASIC17.97■□□□□ 0.47
MMP8P22894 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
MMP8P22894 AC073648.2-201ENST00000510116 352 ntBASIC17.97■□□□□ 0.47
MMP8P22894 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.97■□□□□ 0.47
MMP8P22894 RN7SL510P-201ENST00000581311 263 ntBASIC17.97■□□□□ 0.47
MMP8P22894 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.97■□□□□ 0.47
MMP8P22894 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MMP8P22894 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
MMP8P22894 AL805961.1-202ENST00000641562 540 ntBASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms