Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.74■□□□□ 0.91
KCNA3P22001 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.74■□□□□ 0.91
KCNA3P22001 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC20.74■□□□□ 0.91
KCNA3P22001 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNA3P22001 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC20.74■□□□□ 0.91
KCNA3P22001 LITAF-210ENST00000571976 548 ntTSL 2 BASIC20.74■□□□□ 0.91
KCNA3P22001 LITAF-214ENST00000574703 486 ntTSL 2 BASIC20.74■□□□□ 0.91
KCNA3P22001 AC091167.2-201ENST00000579581 588 ntBASIC20.74■□□□□ 0.91
KCNA3P22001 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.74■□□□□ 0.91
KCNA3P22001 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
KCNA3P22001 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KCNA3P22001 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.74■□□□□ 0.91
KCNA3P22001 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.74■□□□□ 0.91
KCNA3P22001 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
KCNA3P22001 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.74■□□□□ 0.91
KCNA3P22001 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.74■□□□□ 0.91
KCNA3P22001 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KCNA3P22001 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC20.73■□□□□ 0.91
KCNA3P22001 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
KCNA3P22001 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KCNA3P22001 CETN4P-206ENST00000642099 2168 ntBASIC20.73■□□□□ 0.91
KCNA3P22001 TOP3BP1-201ENST00000420768 1380 ntBASIC20.73■□□□□ 0.91
KCNA3P22001 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KCNA3P22001 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.73■□□□□ 0.91
KCNA3P22001 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC20.73■□□□□ 0.91
KCNA3P22001 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KCNA3P22001 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KCNA3P22001 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.73■□□□□ 0.91
KCNA3P22001 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KCNA3P22001 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KCNA3P22001 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC20.73■□□□□ 0.91
KCNA3P22001 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC20.73■□□□□ 0.91
KCNA3P22001 CENPM-206ENST00000407253 818 ntTSL 2 BASIC20.73■□□□□ 0.91
KCNA3P22001 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC20.73■□□□□ 0.91
KCNA3P22001 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KCNA3P22001 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC20.73■□□□□ 0.91
KCNA3P22001 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC20.73■□□□□ 0.91
KCNA3P22001 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC20.73■□□□□ 0.91
KCNA3P22001 ZNF890P-202ENST00000530367 1156 ntBASIC20.73■□□□□ 0.91
KCNA3P22001 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC20.73■□□□□ 0.91
KCNA3P22001 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
KCNA3P22001 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC20.73■□□□□ 0.91
KCNA3P22001 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KCNA3P22001 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC20.73■□□□□ 0.91
KCNA3P22001 AL512343.1-201ENST00000605837 169 ntBASIC20.73■□□□□ 0.91
KCNA3P22001 AL589739.1-201ENST00000607720 493 ntBASIC20.73■□□□□ 0.91
KCNA3P22001 AL133215.2-201ENST00000609242 977 ntBASIC20.73■□□□□ 0.91
KCNA3P22001 LINC01451-201ENST00000623792 534 ntBASIC20.73■□□□□ 0.91
KCNA3P22001 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
KCNA3P22001 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KCNA3P22001 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KCNA3P22001 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC20.73■□□□□ 0.91
KCNA3P22001 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KCNA3P22001 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.73■□□□□ 0.91
KCNA3P22001 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
KCNA3P22001 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.72■□□□□ 0.91
KCNA3P22001 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNA3P22001 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KCNA3P22001 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.72■□□□□ 0.91
KCNA3P22001 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNA3P22001 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNA3P22001 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNA3P22001 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNA3P22001 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNA3P22001 AL023806.1-201ENST00000603994 1649 ntBASIC20.72■□□□□ 0.91
KCNA3P22001 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
KCNA3P22001 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.72■□□□□ 0.91
KCNA3P22001 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
KCNA3P22001 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNA3P22001 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KCNA3P22001 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC20.72■□□□□ 0.91
KCNA3P22001 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
KCNA3P22001 PP14571-201ENST00000404327 934 ntTSL 2 BASIC20.72■□□□□ 0.91
KCNA3P22001 AC087499.6-201ENST00000411576 835 ntBASIC20.72■□□□□ 0.91
KCNA3P22001 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC20.72■□□□□ 0.91
KCNA3P22001 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNA3P22001 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNA3P22001 AC011495.1-201ENST00000498085 584 ntBASIC20.72■□□□□ 0.91
KCNA3P22001 PACS1-203ENST00000524815 628 ntTSL 4 BASIC20.72■□□□□ 0.91
KCNA3P22001 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
KCNA3P22001 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNA3P22001 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.72■□□□□ 0.91
KCNA3P22001 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNA3P22001 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KCNA3P22001 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC20.72■□□□□ 0.91
KCNA3P22001 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNA3P22001 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNA3P22001 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNA3P22001 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
KCNA3P22001 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNA3P22001 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNA3P22001 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KCNA3P22001 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KCNA3P22001 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KCNA3P22001 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
KCNA3P22001 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
KCNA3P22001 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.71■□□□□ 0.91
KCNA3P22001 LYSMD4-203ENST00000378904 2122 ntBASIC20.71■□□□□ 0.91
KCNA3P22001 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KCNA3P22001 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms