Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB4AP20338 AC126335.2-201ENST00000623362 4637 ntBASIC13.19□□□□□ -0.3
RAB4AP20338 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
RAB4AP20338 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.19□□□□□ -0.3
RAB4AP20338 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB4AP20338 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC13.19□□□□□ -0.3
RAB4AP20338 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.19□□□□□ -0.3
RAB4AP20338 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB4AP20338 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
RAB4AP20338 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.19□□□□□ -0.3
RAB4AP20338 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB4AP20338 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB4AP20338 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB4AP20338 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB4AP20338 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
RAB4AP20338 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB4AP20338 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.18□□□□□ -0.3
RAB4AP20338 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
RAB4AP20338 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB4AP20338 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB4AP20338 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.18□□□□□ -0.3
RAB4AP20338 TNRC18P2-201ENST00000417666 2714 ntBASIC13.18□□□□□ -0.3
RAB4AP20338 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAB4AP20338 MIR663A-201ENST00000385250 93 ntBASIC13.18□□□□□ -0.3
RAB4AP20338 PPP1R14BP2-201ENST00000426284 444 ntBASIC13.18□□□□□ -0.3
RAB4AP20338 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
RAB4AP20338 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RAB4AP20338 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC13.18□□□□□ -0.3
RAB4AP20338 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB4AP20338 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
RAB4AP20338 AC131212.4-201ENST00000623606 975 ntBASIC13.18□□□□□ -0.3
RAB4AP20338 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB4AP20338 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB4AP20338 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB4AP20338 KRT8P50-201ENST00000562022 1438 ntBASIC13.18□□□□□ -0.3
RAB4AP20338 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB4AP20338 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB4AP20338 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.18□□□□□ -0.3
RAB4AP20338 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
RAB4AP20338 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB4AP20338 AC087386.2-201ENST00000623212 4637 ntBASIC13.18□□□□□ -0.3
RAB4AP20338 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB4AP20338 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB4AP20338 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
RAB4AP20338 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
RAB4AP20338 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.18□□□□□ -0.3
RAB4AP20338 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13.18□□□□□ -0.3
RAB4AP20338 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.18□□□□□ -0.3
RAB4AP20338 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.18□□□□□ -0.3
RAB4AP20338 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB4AP20338 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAB4AP20338 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB4AP20338 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB4AP20338 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB4AP20338 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB4AP20338 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB4AP20338 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RAB4AP20338 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC13.17□□□□□ -0.3
RAB4AP20338 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC13.17□□□□□ -0.3
RAB4AP20338 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB4AP20338 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB4AP20338 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RAB4AP20338 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC13.17□□□□□ -0.3
RAB4AP20338 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.17□□□□□ -0.3
RAB4AP20338 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB4AP20338 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB4AP20338 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC13.17□□□□□ -0.3
RAB4AP20338 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RAB4AP20338 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB4AP20338 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB4AP20338 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB4AP20338 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
RAB4AP20338 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC13.17□□□□□ -0.3
RAB4AP20338 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB4AP20338 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB4AP20338 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB4AP20338 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC13.17□□□□□ -0.3
RAB4AP20338 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB4AP20338 AC083906.2-201ENST00000511578 360 ntBASIC13.17□□□□□ -0.3
RAB4AP20338 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC13.17□□□□□ -0.3
RAB4AP20338 MIR4758-201ENST00000577688 71 ntBASIC13.17□□□□□ -0.3
RAB4AP20338 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB4AP20338 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB4AP20338 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB4AP20338 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB4AP20338 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.17□□□□□ -0.3
RAB4AP20338 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RAB4AP20338 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC13.17□□□□□ -0.3
RAB4AP20338 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB4AP20338 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.17□□□□□ -0.3
RAB4AP20338 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC13.17□□□□□ -0.3
RAB4AP20338 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB4AP20338 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB4AP20338 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
RAB4AP20338 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.17□□□□□ -0.3
RAB4AP20338 SDHAP2-201ENST00000455183 2001 ntBASIC13.17□□□□□ -0.3
RAB4AP20338 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC13.17□□□□□ -0.3
RAB4AP20338 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB4AP20338 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB4AP20338 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms