Protein–RNA interactions for Protein: P13688

CEACAM1, Carcinoembryonic antigen-related cell adhesion molecule 1, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1P13688 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CEACAM1P13688 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CEACAM1P13688 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CEACAM1P13688 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CEACAM1P13688 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
CEACAM1P13688 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.22■□□□□ 0.19
CEACAM1P13688 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CEACAM1P13688 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.22■□□□□ 0.19
CEACAM1P13688 AC022210.1-201ENST00000449856 793 ntBASIC16.22■□□□□ 0.19
CEACAM1P13688 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.22■□□□□ 0.19
CEACAM1P13688 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CEACAM1P13688 AC105233.2-201ENST00000523697 349 ntBASIC16.22■□□□□ 0.19
CEACAM1P13688 AF228730.5-201ENST00000530288 346 ntBASIC16.22■□□□□ 0.19
CEACAM1P13688 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.22■□□□□ 0.19
CEACAM1P13688 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.22■□□□□ 0.19
CEACAM1P13688 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CEACAM1P13688 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CEACAM1P13688 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.22■□□□□ 0.19
CEACAM1P13688 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.22■□□□□ 0.19
CEACAM1P13688 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CEACAM1P13688 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CEACAM1P13688 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CEACAM1P13688 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CEACAM1P13688 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CEACAM1P13688 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CEACAM1P13688 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.22■□□□□ 0.19
CEACAM1P13688 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.22■□□□□ 0.19
CEACAM1P13688 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CEACAM1P13688 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CEACAM1P13688 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CEACAM1P13688 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.21■□□□□ 0.19
CEACAM1P13688 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CEACAM1P13688 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.21■□□□□ 0.19
CEACAM1P13688 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CEACAM1P13688 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CEACAM1P13688 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.21■□□□□ 0.19
CEACAM1P13688 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CEACAM1P13688 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.21■□□□□ 0.19
CEACAM1P13688 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CEACAM1P13688 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CEACAM1P13688 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CEACAM1P13688 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CEACAM1P13688 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CEACAM1P13688 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CEACAM1P13688 AC142381.1-201ENST00000426099 345 ntBASIC16.21■□□□□ 0.19
CEACAM1P13688 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CEACAM1P13688 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.21■□□□□ 0.19
CEACAM1P13688 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CEACAM1P13688 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.21■□□□□ 0.19
CEACAM1P13688 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.21■□□□□ 0.19
CEACAM1P13688 TEX28P1-201ENST00000613479 1221 ntBASIC16.21■□□□□ 0.19
CEACAM1P13688 TEX28P2-201ENST00000617764 1221 ntBASIC16.21■□□□□ 0.19
CEACAM1P13688 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.21■□□□□ 0.19
CEACAM1P13688 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CEACAM1P13688 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CEACAM1P13688 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CEACAM1P13688 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CEACAM1P13688 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CEACAM1P13688 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.21■□□□□ 0.19
CEACAM1P13688 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CEACAM1P13688 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CEACAM1P13688 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CEACAM1P13688 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CEACAM1P13688 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
CEACAM1P13688 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
CEACAM1P13688 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.21■□□□□ 0.18
CEACAM1P13688 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.21■□□□□ 0.18
CEACAM1P13688 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.21■□□□□ 0.18
CEACAM1P13688 AC016027.1-202ENST00000607927 1699 ntBASIC16.21■□□□□ 0.18
CEACAM1P13688 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.2■□□□□ 0.18
CEACAM1P13688 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.2■□□□□ 0.18
CEACAM1P13688 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.2■□□□□ 0.18
CEACAM1P13688 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CEACAM1P13688 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CEACAM1P13688 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.2■□□□□ 0.18
CEACAM1P13688 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CEACAM1P13688 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CEACAM1P13688 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CEACAM1P13688 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.2■□□□□ 0.18
CEACAM1P13688 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CEACAM1P13688 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CEACAM1P13688 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CEACAM1P13688 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.2■□□□□ 0.18
CEACAM1P13688 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.2■□□□□ 0.18
CEACAM1P13688 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CEACAM1P13688 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CEACAM1P13688 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.2■□□□□ 0.18
CEACAM1P13688 AL138918.1-201ENST00000568306 659 ntBASIC16.2■□□□□ 0.18
CEACAM1P13688 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.2■□□□□ 0.18
CEACAM1P13688 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.2■□□□□ 0.18
CEACAM1P13688 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CEACAM1P13688 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CEACAM1P13688 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CEACAM1P13688 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.2■□□□□ 0.18
CEACAM1P13688 BTBD7P1-201ENST00000447253 1453 ntBASIC16.2■□□□□ 0.18
CEACAM1P13688 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CEACAM1P13688 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CEACAM1P13688 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CEACAM1P13688 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.2■□□□□ 0.18
CEACAM1P13688 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms