Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KRT3P12035 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KRT3P12035 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KRT3P12035 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.07■□□□□ 0.48
KRT3P12035 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KRT3P12035 SAPCD2P3-201ENST00000455031 850 ntBASIC18.07■□□□□ 0.48
KRT3P12035 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.07■□□□□ 0.48
KRT3P12035 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.07■□□□□ 0.48
KRT3P12035 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
KRT3P12035 AC064862.7-201ENST00000604520 867 ntBASIC18.07■□□□□ 0.48
KRT3P12035 IFNL4P1-201ENST00000607083 540 ntBASIC18.07■□□□□ 0.48
KRT3P12035 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
KRT3P12035 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KRT3P12035 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KRT3P12035 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
KRT3P12035 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KRT3P12035 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.07■□□□□ 0.48
KRT3P12035 FRMD8P1-201ENST00000440433 1524 ntBASIC18.07■□□□□ 0.48
KRT3P12035 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
KRT3P12035 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KRT3P12035 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KRT3P12035 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.06■□□□□ 0.48
KRT3P12035 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
KRT3P12035 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.06■□□□□ 0.48
KRT3P12035 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
KRT3P12035 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.06■□□□□ 0.48
KRT3P12035 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT3P12035 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT3P12035 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT3P12035 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
KRT3P12035 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT3P12035 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT3P12035 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT3P12035 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
KRT3P12035 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.06■□□□□ 0.48
KRT3P12035 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT3P12035 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.06■□□□□ 0.48
KRT3P12035 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.06■□□□□ 0.48
KRT3P12035 SCARNA2-201ENST00000458748 420 ntBASIC18.06■□□□□ 0.48
KRT3P12035 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.06■□□□□ 0.48
KRT3P12035 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
KRT3P12035 AF238378.1-201ENST00000526806 358 ntBASIC18.06■□□□□ 0.48
KRT3P12035 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KRT3P12035 SART3-203ENST00000546611 1184 ntBASIC18.06■□□□□ 0.48
KRT3P12035 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.06■□□□□ 0.48
KRT3P12035 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
KRT3P12035 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.06■□□□□ 0.48
KRT3P12035 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
KRT3P12035 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
KRT3P12035 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.06■□□□□ 0.48
KRT3P12035 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.06■□□□□ 0.48
KRT3P12035 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT3P12035 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KRT3P12035 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KRT3P12035 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KRT3P12035 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
KRT3P12035 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KRT3P12035 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT3P12035 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.06■□□□□ 0.48
KRT3P12035 NCF1C-201ENST00000438382 1427 ntBASIC18.06■□□□□ 0.48
KRT3P12035 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KRT3P12035 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.06■□□□□ 0.48
KRT3P12035 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
KRT3P12035 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT3P12035 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT3P12035 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.05■□□□□ 0.48
KRT3P12035 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.05■□□□□ 0.48
KRT3P12035 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT3P12035 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT3P12035 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KRT3P12035 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.05■□□□□ 0.48
KRT3P12035 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT3P12035 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KRT3P12035 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.05■□□□□ 0.48
KRT3P12035 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KRT3P12035 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
KRT3P12035 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
KRT3P12035 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
KRT3P12035 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.05■□□□□ 0.48
KRT3P12035 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT3P12035 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.05■□□□□ 0.48
KRT3P12035 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.05■□□□□ 0.48
KRT3P12035 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.05■□□□□ 0.48
KRT3P12035 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KRT3P12035 NKILA-202ENST00000614771 2598 ntBASIC18.05■□□□□ 0.48
KRT3P12035 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT3P12035 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.05■□□□□ 0.48
KRT3P12035 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
KRT3P12035 AC106886.4-201ENST00000623557 2502 ntBASIC18.05■□□□□ 0.48
KRT3P12035 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT3P12035 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT3P12035 AC005915.1-201ENST00000624912 2018 ntBASIC18.05■□□□□ 0.48
KRT3P12035 AC105020.1-201ENST00000435356 2205 ntBASIC18.04■□□□□ 0.48
KRT3P12035 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.04■□□□□ 0.48
KRT3P12035 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT3P12035 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
KRT3P12035 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT3P12035 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT3P12035 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.04■□□□□ 0.48
KRT3P12035 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms