Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CD28P10747 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD28P10747 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD28P10747 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD28P10747 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD28P10747 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CD28P10747 MKNK2P1-201ENST00000437526 628 ntBASIC13.41□□□□□ -0.26
CD28P10747 RHOQP3-201ENST00000437982 621 ntBASIC13.41□□□□□ -0.26
CD28P10747 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD28P10747 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.41□□□□□ -0.26
CD28P10747 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CD28P10747 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
CD28P10747 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CD28P10747 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.41□□□□□ -0.26
CD28P10747 AC023141.13-201ENST00000604991 943 ntBASIC13.41□□□□□ -0.26
CD28P10747 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CD28P10747 AC007064.4-201ENST00000637740 555 ntBASIC13.41□□□□□ -0.26
CD28P10747 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD28P10747 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CD28P10747 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CD28P10747 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CD28P10747 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC13.41□□□□□ -0.26
CD28P10747 PXK-206ENST00000463280 2825 ntTSL 2 BASIC13.41□□□□□ -0.26
CD28P10747 AL133373.2-201ENST00000623187 2828 ntBASIC13.41□□□□□ -0.26
CD28P10747 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD28P10747 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD28P10747 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD28P10747 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC13.41□□□□□ -0.26
CD28P10747 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CD28P10747 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC13.41□□□□□ -0.26
CD28P10747 ELL2P1-201ENST00000413990 1906 ntBASIC13.41□□□□□ -0.26
CD28P10747 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CD28P10747 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CD28P10747 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CD28P10747 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD28P10747 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CD28P10747 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD28P10747 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CD28P10747 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CD28P10747 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CD28P10747 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CD28P10747 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD28P10747 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD28P10747 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CD28P10747 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CD28P10747 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
CD28P10747 AL354751.1-201ENST00000412768 1863 ntBASIC13.4□□□□□ -0.26
CD28P10747 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
CD28P10747 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CD28P10747 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CD28P10747 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD28P10747 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CD28P10747 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD28P10747 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
CD28P10747 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC13.4□□□□□ -0.26
CD28P10747 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CD28P10747 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD28P10747 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC13.4□□□□□ -0.26
CD28P10747 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD28P10747 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD28P10747 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD28P10747 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CD28P10747 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD28P10747 AC254562.1-201ENST00000417586 456 ntBASIC13.4□□□□□ -0.26
CD28P10747 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.4□□□□□ -0.26
CD28P10747 CNN2P11-201ENST00000429351 262 ntBASIC13.4□□□□□ -0.26
CD28P10747 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD28P10747 AC074386.1-202ENST00000463561 864 ntBASIC13.4□□□□□ -0.26
CD28P10747 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.4□□□□□ -0.26
CD28P10747 CXCL1P1-201ENST00000502804 216 ntBASIC13.4□□□□□ -0.26
CD28P10747 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.4□□□□□ -0.26
CD28P10747 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.4□□□□□ -0.26
CD28P10747 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC13.4□□□□□ -0.26
CD28P10747 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CD28P10747 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CD28P10747 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.4□□□□□ -0.26
CD28P10747 PCDHB18P-201ENST00000524813 2368 ntBASIC13.4□□□□□ -0.26
CD28P10747 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC13.4□□□□□ -0.26
CD28P10747 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD28P10747 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CD28P10747 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC13.4□□□□□ -0.26
CD28P10747 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
CD28P10747 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD28P10747 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.4□□□□□ -0.26
CD28P10747 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC13.39□□□□□ -0.27
CD28P10747 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC13.39□□□□□ -0.27
CD28P10747 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD28P10747 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CD28P10747 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD28P10747 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.39□□□□□ -0.27
CD28P10747 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD28P10747 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD28P10747 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CD28P10747 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CD28P10747 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD28P10747 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD28P10747 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD28P10747 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD28P10747 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD28P10747 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms