Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPRFP10586 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRFP10586 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPRFP10586 KRT8P49-201ENST00000604166 1432 ntBASIC19.41■□□□□ 0.7
PTPRFP10586 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPRFP10586 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRFP10586 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.41■□□□□ 0.7
PTPRFP10586 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
PTPRFP10586 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.41■□□□□ 0.7
PTPRFP10586 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPRFP10586 OR8S1-201ENST00000310194 1080 ntBASIC19.41■□□□□ 0.7
PTPRFP10586 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PTPRFP10586 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC19.41■□□□□ 0.7
PTPRFP10586 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.41■□□□□ 0.7
PTPRFP10586 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.41■□□□□ 0.7
PTPRFP10586 RARRES2P9-201ENST00000565168 469 ntBASIC19.41■□□□□ 0.7
PTPRFP10586 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.41■□□□□ 0.7
PTPRFP10586 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRFP10586 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRFP10586 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRFP10586 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRFP10586 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRFP10586 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.4■□□□□ 0.7
PTPRFP10586 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.4■□□□□ 0.7
PTPRFP10586 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.4■□□□□ 0.7
PTPRFP10586 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.4■□□□□ 0.7
PTPRFP10586 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.4■□□□□ 0.7
PTPRFP10586 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.4■□□□□ 0.7
PTPRFP10586 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
PTPRFP10586 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPRFP10586 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPRFP10586 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.4■□□□□ 0.7
PTPRFP10586 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PTPRFP10586 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.4■□□□□ 0.7
PTPRFP10586 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPRFP10586 AL021920.2-201ENST00000624828 1351 ntBASIC19.4■□□□□ 0.7
PTPRFP10586 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
PTPRFP10586 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.39■□□□□ 0.7
PTPRFP10586 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PTPRFP10586 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PTPRFP10586 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.7
PTPRFP10586 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC19.39■□□□□ 0.7
PTPRFP10586 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.39■□□□□ 0.7
PTPRFP10586 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC19.39■□□□□ 0.7
PTPRFP10586 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.39■□□□□ 0.7
PTPRFP10586 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.39■□□□□ 0.7
PTPRFP10586 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.39■□□□□ 0.7
PTPRFP10586 COQ6-210ENST00000554920 649 ntTSL 3 BASIC19.39■□□□□ 0.7
PTPRFP10586 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.39■□□□□ 0.7
PTPRFP10586 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.39■□□□□ 0.7
PTPRFP10586 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTPRFP10586 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTPRFP10586 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPRFP10586 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPRFP10586 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPRFP10586 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.39■□□□□ 0.69
PTPRFP10586 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPRFP10586 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPRFP10586 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.39■□□□□ 0.69
PTPRFP10586 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPRFP10586 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.39■□□□□ 0.69
PTPRFP10586 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTPRFP10586 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.39■□□□□ 0.69
PTPRFP10586 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.39■□□□□ 0.69
PTPRFP10586 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPRFP10586 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.39■□□□□ 0.69
PTPRFP10586 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.38■□□□□ 0.69
PTPRFP10586 AC016396.2-201ENST00000562575 1417 ntBASIC19.38■□□□□ 0.69
PTPRFP10586 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTPRFP10586 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTPRFP10586 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPRFP10586 AC135050.7-201ENST00000624508 2218 ntBASIC19.38■□□□□ 0.69
PTPRFP10586 TOP3BP1-201ENST00000420768 1380 ntBASIC19.38■□□□□ 0.69
PTPRFP10586 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PTPRFP10586 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPRFP10586 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
PTPRFP10586 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPRFP10586 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.38■□□□□ 0.69
PTPRFP10586 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
PTPRFP10586 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
PTPRFP10586 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
PTPRFP10586 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PTPRFP10586 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PTPRFP10586 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC19.38■□□□□ 0.69
PTPRFP10586 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTPRFP10586 AL596325.1-201ENST00000563991 1082 ntBASIC19.38■□□□□ 0.69
PTPRFP10586 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.38■□□□□ 0.69
PTPRFP10586 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
PTPRFP10586 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.38■□□□□ 0.69
PTPRFP10586 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.38■□□□□ 0.69
PTPRFP10586 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPRFP10586 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPRFP10586 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PTPRFP10586 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTPRFP10586 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTPRFP10586 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTPRFP10586 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC19.37■□□□□ 0.69
PTPRFP10586 PIN1P1-201ENST00000412108 996 ntBASIC19.37■□□□□ 0.69
PTPRFP10586 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.37■□□□□ 0.69
PTPRFP10586 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms