Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.08■□□□□ 0
UBCP0CG48 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UBCP0CG48 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0
UBCP0CG48 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UBCP0CG48 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UBCP0CG48 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UBCP0CG48 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UBCP0CG48 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
UBCP0CG48 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.08■□□□□ 0
UBCP0CG48 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
UBCP0CG48 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UBCP0CG48 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.08■□□□□ 0
UBCP0CG48 KRT8P10-201ENST00000450021 1447 ntBASIC15.08■□□□□ 0
UBCP0CG48 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
UBCP0CG48 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.08■□□□□ 0
UBCP0CG48 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.08■□□□□ 0
UBCP0CG48 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.08■□□□□ 0
UBCP0CG48 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.07■□□□□ 0
UBCP0CG48 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.07■□□□□ 0
UBCP0CG48 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UBCP0CG48 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
UBCP0CG48 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UBCP0CG48 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.07■□□□□ 0
UBCP0CG48 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
UBCP0CG48 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.07■□□□□ 0
UBCP0CG48 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.07■□□□□ 0
UBCP0CG48 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UBCP0CG48 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
UBCP0CG48 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
UBCP0CG48 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.07■□□□□ 0
UBCP0CG48 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UBCP0CG48 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.07■□□□□ 0
UBCP0CG48 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
UBCP0CG48 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.07■□□□□ 0
UBCP0CG48 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.07■□□□□ 0
UBCP0CG48 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.07■□□□□ 0
UBCP0CG48 AC246785.2-201ENST00000432512 513 ntBASIC15.07■□□□□ 0
UBCP0CG48 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
UBCP0CG48 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UBCP0CG48 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.07■□□□□ 0
UBCP0CG48 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.07■□□□□ 0
UBCP0CG48 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.07■□□□□ 0
UBCP0CG48 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
UBCP0CG48 AC005336.2-201ENST00000593183 939 ntBASIC15.07■□□□□ 0
UBCP0CG48 IGHV3-41-201ENST00000613121 348 ntBASIC15.07■□□□□ 0
UBCP0CG48 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.07■□□□□ 0
UBCP0CG48 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
UBCP0CG48 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
UBCP0CG48 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
UBCP0CG48 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
UBCP0CG48 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.07■□□□□ 0
UBCP0CG48 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UBCP0CG48 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.07■□□□□ 0
UBCP0CG48 AL353593.2-201ENST00000602529 1483 ntBASIC15.07■□□□□ 0
UBCP0CG48 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UBCP0CG48 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.07■□□□□ 0
UBCP0CG48 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.07■□□□□ 0
UBCP0CG48 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.07■□□□□ 0
UBCP0CG48 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.07■□□□□ 0
UBCP0CG48 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
UBCP0CG48 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBCP0CG48 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBCP0CG48 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
UBCP0CG48 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.06■□□□□ 0
UBCP0CG48 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBCP0CG48 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.06■□□□□ 0
UBCP0CG48 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.06■□□□□ 0
UBCP0CG48 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.06■□□□□ 0
UBCP0CG48 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBCP0CG48 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBCP0CG48 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
UBCP0CG48 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.06■□□□□ 0
UBCP0CG48 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.06■□□□□ 0
UBCP0CG48 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.06■□□□□ 0
UBCP0CG48 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.06■□□□□ 0
UBCP0CG48 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
UBCP0CG48 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
UBCP0CG48 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBCP0CG48 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.06■□□□□ 0
UBCP0CG48 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBCP0CG48 VENTXP7-201ENST00000475503 772 ntBASIC15.06■□□□□ 0
UBCP0CG48 STK19B-204ENST00000512515 211 ntBASIC15.06■□□□□ 0
UBCP0CG48 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
UBCP0CG48 AC022616.7-201ENST00000525383 220 ntBASIC15.06■□□□□ 0
UBCP0CG48 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.06■□□□□ 0
UBCP0CG48 LINC01023-201ENST00000606054 436 ntBASIC15.06■□□□□ 0
UBCP0CG48 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.06■□□□□ 0
UBCP0CG48 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.06■□□□□ 0
UBCP0CG48 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
UBCP0CG48 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
UBCP0CG48 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.06■□□□□ 0
UBCP0CG48 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
UBCP0CG48 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.06■□□□□ 0
UBCP0CG48 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
UBCP0CG48 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBCP0CG48 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.06■□□□□ 0
UBCP0CG48 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBCP0CG48 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.06■□□□□ 0
UBCP0CG48 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.06■□□□□ 0
UBCP0CG48 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms