Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CTSBP07858 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTSBP07858 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTSBP07858 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.17■□□□□ 0.18
CTSBP07858 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTSBP07858 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CTSBP07858 AC129492.6-201ENST00000611383 1305 ntBASIC16.17■□□□□ 0.18
CTSBP07858 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CTSBP07858 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CTSBP07858 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTSBP07858 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTSBP07858 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTSBP07858 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTSBP07858 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTSBP07858 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.16■□□□□ 0.18
CTSBP07858 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTSBP07858 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTSBP07858 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.16■□□□□ 0.18
CTSBP07858 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTSBP07858 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTSBP07858 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTSBP07858 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTSBP07858 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.16■□□□□ 0.18
CTSBP07858 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.16■□□□□ 0.18
CTSBP07858 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CTSBP07858 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.16■□□□□ 0.18
CTSBP07858 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.16■□□□□ 0.18
CTSBP07858 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTSBP07858 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.16■□□□□ 0.18
CTSBP07858 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.16■□□□□ 0.18
CTSBP07858 AL031432.2-201ENST00000566714 459 ntBASIC16.16■□□□□ 0.18
CTSBP07858 AL928711.1-201ENST00000570165 459 ntBASIC16.16■□□□□ 0.18
CTSBP07858 MIR3687-2-201ENST00000577708 61 ntBASIC16.16■□□□□ 0.18
CTSBP07858 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
CTSBP07858 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.16■□□□□ 0.18
CTSBP07858 MIR4469-201ENST00000583919 79 ntBASIC16.16■□□□□ 0.18
CTSBP07858 MIR3687-1-201ENST00000614492 61 ntBASIC16.16■□□□□ 0.18
CTSBP07858 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.16■□□□□ 0.18
CTSBP07858 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
CTSBP07858 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.16■□□□□ 0.18
CTSBP07858 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTSBP07858 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTSBP07858 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CTSBP07858 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
CTSBP07858 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTSBP07858 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.16■□□□□ 0.18
CTSBP07858 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTSBP07858 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CTSBP07858 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.16■□□□□ 0.18
CTSBP07858 AL023806.1-201ENST00000603994 1649 ntBASIC16.16■□□□□ 0.18
CTSBP07858 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTSBP07858 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTSBP07858 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CTSBP07858 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.15■□□□□ 0.18
CTSBP07858 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CTSBP07858 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.15■□□□□ 0.18
CTSBP07858 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTSBP07858 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTSBP07858 SLC22A20-204ENST00000530038 1673 ntBASIC16.15■□□□□ 0.18
CTSBP07858 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTSBP07858 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CTSBP07858 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.15■□□□□ 0.18
CTSBP07858 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTSBP07858 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CTSBP07858 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTSBP07858 HTR5BP-201ENST00000430851 1154 ntBASIC16.15■□□□□ 0.18
CTSBP07858 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CTSBP07858 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.15■□□□□ 0.18
CTSBP07858 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.15■□□□□ 0.18
CTSBP07858 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.15■□□□□ 0.18
CTSBP07858 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.15■□□□□ 0.18
CTSBP07858 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.15■□□□□ 0.18
CTSBP07858 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.15■□□□□ 0.18
CTSBP07858 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTSBP07858 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.15■□□□□ 0.18
CTSBP07858 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.15■□□□□ 0.18
CTSBP07858 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
CTSBP07858 AC007064.4-201ENST00000637740 555 ntBASIC16.15■□□□□ 0.18
CTSBP07858 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTSBP07858 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTSBP07858 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CTSBP07858 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CTSBP07858 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CTSBP07858 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CTSBP07858 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CTSBP07858 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.15■□□□□ 0.18
CTSBP07858 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CTSBP07858 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTSBP07858 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CTSBP07858 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CTSBP07858 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CTSBP07858 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CTSBP07858 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CTSBP07858 AC060834.1-201ENST00000443027 2032 ntBASIC16.14■□□□□ 0.17
CTSBP07858 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CTSBP07858 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CTSBP07858 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.14■□□□□ 0.17
CTSBP07858 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CTSBP07858 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CTSBP07858 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms