Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.58■□□□□ 0.89
APPP05067 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.58■□□□□ 0.89
APPP05067 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
APPP05067 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.58■□□□□ 0.89
APPP05067 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.58■□□□□ 0.89
APPP05067 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.58■□□□□ 0.89
APPP05067 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC20.58■□□□□ 0.89
APPP05067 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
APPP05067 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
APPP05067 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
APPP05067 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
APPP05067 PI4KAP1-204ENST00000612579 1703 ntBASIC20.58■□□□□ 0.88
APPP05067 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.88
APPP05067 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
APPP05067 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
APPP05067 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.58■□□□□ 0.88
APPP05067 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.58■□□□□ 0.88
APPP05067 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
APPP05067 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.57■□□□□ 0.88
APPP05067 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
APPP05067 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
APPP05067 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.57■□□□□ 0.88
APPP05067 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
APPP05067 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
APPP05067 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.57■□□□□ 0.88
APPP05067 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
APPP05067 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
APPP05067 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
APPP05067 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
APPP05067 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
APPP05067 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
APPP05067 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.57■□□□□ 0.88
APPP05067 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.57■□□□□ 0.88
APPP05067 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.57■□□□□ 0.88
APPP05067 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
APPP05067 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.57■□□□□ 0.88
APPP05067 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
APPP05067 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.57■□□□□ 0.88
APPP05067 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.57■□□□□ 0.88
APPP05067 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.57■□□□□ 0.88
APPP05067 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.57■□□□□ 0.88
APPP05067 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
APPP05067 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.57■□□□□ 0.88
APPP05067 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
APPP05067 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC20.57■□□□□ 0.88
APPP05067 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
APPP05067 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
APPP05067 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
APPP05067 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
APPP05067 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
APPP05067 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
APPP05067 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
APPP05067 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
APPP05067 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC20.56■□□□□ 0.88
APPP05067 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
APPP05067 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
APPP05067 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
APPP05067 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.56■□□□□ 0.88
APPP05067 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
APPP05067 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
APPP05067 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.56■□□□□ 0.88
APPP05067 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.56■□□□□ 0.88
APPP05067 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
APPP05067 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.56■□□□□ 0.88
APPP05067 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.56■□□□□ 0.88
APPP05067 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
APPP05067 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.56■□□□□ 0.88
APPP05067 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
APPP05067 ZNF259P1-201ENST00000407656 1365 ntBASIC20.56■□□□□ 0.88
APPP05067 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
APPP05067 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
APPP05067 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.56■□□□□ 0.88
APPP05067 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
APPP05067 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
APPP05067 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
APPP05067 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
APPP05067 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
APPP05067 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.55■□□□□ 0.88
APPP05067 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
APPP05067 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
APPP05067 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
APPP05067 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.55■□□□□ 0.88
APPP05067 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
APPP05067 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
APPP05067 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.55■□□□□ 0.88
APPP05067 Z83851.2-201ENST00000609564 659 ntBASIC20.55■□□□□ 0.88
APPP05067 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.55■□□□□ 0.88
APPP05067 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
APPP05067 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
APPP05067 AL805961.1-202ENST00000641562 540 ntBASIC20.55■□□□□ 0.88
APPP05067 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
APPP05067 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
APPP05067 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
APPP05067 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.55■□□□□ 0.88
APPP05067 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
APPP05067 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
APPP05067 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.55■□□□□ 0.88
APPP05067 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
APPP05067 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
APPP05067 AC116353.5-201ENST00000638148 1699 ntBASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms